Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00172 ATGGATTTTGGGTTTGAAGCATCTCTAAGACTAGCATGCCCAACTGAGATTCCTTTGACAAACCTCACATTTGTACCTAATGACATGACCCCCGTTATATTTGACAACCACTATTACCGAGACATTATTATGGGGAGAGGCTTGTTTGGTATTGACTCCAGTATTTCTAGAGATCCGCGAACAGCACCCTTTGTCATGCGGTTTGCTATGGATCAGAACTACTTCTTCAAGGCTTTCTCATCTGCATTTGTTAAGCTTTCTTCTATCACAGATGTGCATGGTGATGTCCGAAGGCAATGCAACCAGGTAAACTAG 315 0.4254 MDFGFEASLRLACPTEIPLTNLTFVPNDMTPVIFDNHYYRDIIMGRGLFGIDSSISRDPRTAPFVMRFAMDQNYFFKAFSSAFVKLSSITDVHGDVRRQCNQVN 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00172 104 Gene3D - 87 104 - -
Pumo4g00172 104 ProSiteProfiles Plant heme peroxidase family profile. 1 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00172 104 PANTHER - 1 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00172 104 Gene3D Peroxidase, domain 2 2 86 - -
Pumo4g00172 104 Pfam Peroxidase 8 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00172 104 SUPERFAMILY Heme-dependent peroxidases 2 104 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00172 Pumo-Chr4 2134186 2134500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00172 1 104 Peroxidase AT3G17070 54.545 6.57e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00172 K00430 - gmx:100806951 199.904