Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00163 ATGAAGCTTCCTTATCCTATTCCTACGCCGGGACCAGGAGGAATAATCTTCTGCTGGCAGGACTCACCCTTATTCAAAATGCTGCTGCTAAAGGAGCAGGGTACTAGCAGGCCTACATGTCAAGATGAGATTGAGTTTTCACCTGATGATCTGCAGGAGCTTGTGCATTCTTTATCATATATGTATCAGAGGAGCACCACTGCCTTTCTGTTAGTTACTCCAATATGCTATGCTCACCTGGCTGCAACTCAGAACTCAGATGGGTCTGTTTATGAAATTTGA 282 0.4468 MKLPYPIPTPGPGGIIFCWQDSPLFKMLLLKEQGTSRPTCQDEIEFSPDDLQELVHSLSYMYQRSTTAFLLVTPICYAHLAATQNSDGSVYEI 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00163 93 Gene3D - 21 88 IPR036397 GO:0003676
Pumo4g00163 93 ProSiteProfiles Piwi domain profile. 42 82 IPR003165 GO:0003676
Pumo4g00163 93 SUPERFAMILY Ribonuclease H-like 32 84 IPR012337 -
Pumo4g00163 93 Pfam Piwi domain 27 84 IPR003165 GO:0003676
Pumo4g00163 93 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 29 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00163 Pumo-Chr4 2011232 2012432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00163 33 82 Eukaryotic Initiation Factors Gene Family AT1G48410 48.148 4.42e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00163 K11593 - gmx:100779439 83.5741