Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00156 ATGAACGCCTCAAAGCAACAGAAGCAGCATCAGCTCCAACAAAGAGGATGCAAGGCCTTGTGTTGCAGTTGCAGGTTCAGTGTTTCTTCCTCTGAAGAAGCAGAAAGCTCAGCCTCTGATAGGTTCCCTTCTGTTTCAAGCCTTGCACATGCCATGGTGCAAGAGAGACTTGATCAAATGATTAGAGAAAGAATGGAAGCTAGGCATGTAGAGAGAAGAAGGCAGCAGAGCAGAGAAGGGACCAAGTTTGTTGTAATGGTAGCAATGGAGAAGAGCTCTTATGATCCAAGAGAGGATTTCAGGGAGTCCATGATGGAGATGATAACTGCCAACCACCTTCAAGATGCCAAAGATCTTCGTAGTCTATTGAATTATTATATCTCCATGAACTCTAATGAGTACCATAGTCTTATCCTTGAAGTTTTTCATGAGGCAGAAAATACATGGCTTGTGGGGTTGTTACTATCACTTGCCCAAAACAAGCAGAATATTATCCAGAAATTGCTTGATCACATCAATCTGAGAAAGTGA 531 0.4256 MNASKQQKQHQLQQRGCKALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIRERMEARHVERRRQQSREGTKFVVMVAMEKSSYDPREDFRESMMEMITANHLQDAKDLRSLLNYYISMNSNEYHSLILEVFHEAENTWLVGLLLSLAQNKQNIIQKLLDHINLRK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00156 176 NCBIfam uncharacterized plant-specific domain TIGR01568 87 144 IPR006458 -
Pumo4g00156 176 Pfam Transcriptional repressor, ovate 93 144 IPR006458 -
Pumo4g00156 176 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 145 IPR038933 GO:0045892
Pumo4g00156 176 ProSiteProfiles OVATE domain profile. 89 148 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00156 Pumo-Chr4 1878175 1879871 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo4g00156 Ovate 6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00156 - - var:108330150 246.899