Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00152 ATGAAGCTCGACAACTCCAACGGCCAGGCGCCCCTCGCCGCCACCGCCGTCGACGATGACCCCGAGGAGGAGATATTCGTGCCGCCGCTCAACTTCGCGATGGTCGACAACGGCATTTTTAGGTCTGGCTTTCCCGATTCTGCCAACTTCGGATTCCTCAAATCCCTCCGTCTCCGCTCCGTAATGTGTTTGTGTCCTGAACCGTATCCAGAAACGACTTCGGAATTTTTGAAGGCCAACGGAATAAGGCTTTATCAGTTCGGGATTGATGGCTGTAAGGAACCCTTTGTCAACATCCCAAATGATACAATTCGTGAAGCTTTGAAAGTAGCCCTCGATGTTAGGAACCACCCCCTGCTGATTCACTGTAAACGAGGGAAGCACCGCACTGGTTGTCTTGTGGGATGCATAAGAAGATTGCAGAGGTGGTGTCTGTCATCTGTTTTTGATGAGTACCAAAGGTTTGCGGGTGCCAAAGCCAGAGTGTCAGACCAGAGGTTCATCGAATTGTTTGATATCTCTTGTTTGAAGCACCACCCACTGTCTTTTTCATGCTCCAGGAAATAG 567 0.5026 MKLDNSNGQAPLAATAVDDDPEEEIFVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSVMCLCPEPYPETTSEFLKANGIRLYQFGIDGCKEPFVNIPNDTIREALKVALDVRNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKHHPLSFSCSRK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00152 188 ProSiteProfiles Dual specificity protein phosphatase domain profile. 31 183 IPR020422 GO:0006470|GO:0008138
Pumo4g00152 188 PRINTS Plant and fungal dual specificity phosphatase signature 26 43 IPR020428 GO:0016791
Pumo4g00152 188 PRINTS Plant and fungal dual specificity phosphatase signature 63 76 IPR020428 GO:0016791
Pumo4g00152 188 PRINTS Plant and fungal dual specificity phosphatase signature 82 96 IPR020428 GO:0016791
Pumo4g00152 188 PRINTS Plant and fungal dual specificity phosphatase signature 99 113 IPR020428 GO:0016791
Pumo4g00152 188 FunFam probable tyrosine-protein phosphatase At1g05000 25 175 - -
Pumo4g00152 188 PANTHER TYROSINE-PROTEIN PHOSPHATASE 22 178 - -
Pumo4g00152 188 Gene3D Protein tyrosine phosphatase superfamily 25 175 IPR029021 -
Pumo4g00152 188 ProSitePatterns Tyrosine specific protein phosphatases active site. 121 131 IPR016130 GO:0016311|GO:0016791
Pumo4g00152 188 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 26 173 IPR029021 -
Pumo4g00152 188 Pfam Tyrosine phosphatase family 27 180 IPR004861 -
Pumo4g00152 188 CDD PFA-DSP_Siw14 26 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00152 Pumo-Chr4 1822573 1826045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00152 1 188 Protein tyrosine phosphatase (PTP) family AT4G03960 66.492 2.59e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00152 K18045 - gmx:100785520 368.622