Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00106 ATGTCAGAAATGATGAGAAACCCAAGAGTAAGGGAGAAGGCACAAGCTGAGATTAGAGAGACGTTGAGAGGAAAGGAAACAATCCATGAGAGCAACCTAGGAGAACTAAGCTACCTCAAGGCAGTAATAAAAGAAACCATGAGGTTACACCCACCTCTTCCTTTGTTGCTTCCAAGAGAATGCATAGAAGCATGCAGGATCGATGGATATGATTTACCCACCAAGACCAATGGAAGAGATCCTGAGTACTGGCACGATGCAGAGAGCTTTGTACCAGAAAGGTTCCATGGTACATCCATTGATTTCAAAGGAACAGACTTTGAATACATCCCTTTTGGGGCAGGAAGGAGAATGTGTCCGGGCCTTTCATTTGGTATAGCCAATGTGGAGTTTGCTCTAGCCAAATTACTCTATCACTTCAACTGGGAACTCCCAGAAGGAATGAAACCAGAGGAGTTTGACATGGATGAAGCATTTGGAGCTGTGGTTGGAAGGAAAAACAATCTTCACTTGATTCCCATTCCGTATAATCCTTCAATCCATGATAATGGCAAATGA 558 0.4337 MSEMMRNPRVREKAQAEIRETLRGKETIHESNLGELSYLKAVIKETMRLHPPLPLLLPRECIEACRIDGYDLPTKTNGRDPEYWHDAESFVPERFHGTSIDFKGTDFEYIPFGAGRRMCPGLSFGIANVEFALAKLLYHFNWELPEGMKPEEFDMDEAFGAVVGRKNNLHLIPIPYNPSIHDNGK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00106 185 PANTHER OS08G0105600 PROTEIN 1 178 - -
Pumo4g00106 185 FunFam Predicted protein 1 171 - -
Pumo4g00106 185 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 PRINTS E-class P450 group I signature 119 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 PRINTS E-class P450 group I signature 73 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 PRINTS E-class P450 group I signature 109 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 Pfam Cytochrome P450 3 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 SUPERFAMILY Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 Gene3D Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 PRINTS P450 superfamily signature 110 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00106 185 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 112 121 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00106 Pumo-Chr4 1397018 1397575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00106 1 176 Cytochrome P450 AT3G26330 52.174 1.96e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00106 - K15472 gmx:100800554 340.502