Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00105 ATGGTTGCTCCCAGTATTGGGATTCTTGATTCTGTTGGAGTGAGTGCTGTGGAGACACAGGAAGAAGTTCGAAGGGGCCCAAAAGACATATTTGGGGCTGGAACTGATACCTCAGCAACAGTACTAGAGTGGGTTATGTCAGAGTTATTGAAAAACCCAAGAGTGATGAAAAAGGCACAGGCTGAAATAAGAGAAGCTTTTAGGGGAAAGAAAACAATTCGTGAGAGTGATATATATCAACTTAGCTACTTGAAGTCAGTGATCAAAGAAACCTTGAGGTTACATCCACCTGCTCCCTTGTTGCTTCCAAGAGAATGCAGGGAACCATGCAAGATTGGTGGATATGAAATACCTATCAAGACCAAAGTGATTGTAAATGCATGGGCACTTGGAAGAGATCCCAAGCATTGGTATGATGCAGAGAAGTTTATGCCTGAGAGGTTCGATGGCACAGGTTATGATTTTAAAGGGAATAATTTTGAGTACATCCCTTTTGGGGCAGGGAGGAGAATGTGTCCTGGCATTTTACTTGGCTTAGCAAATGTTGAGCTTCCTCTTGCTGCATTGCTGTATCACTTTGACTGGGAACTCCCCAATGGAATGAAACCAGAGGACTTGGATATGACTGAAGCCTTTGGAGCTGCAGTGGCAAGGAAAAACAACCTATATTTGATCCCAACTCCATATGACTATTCCCTTCATCATCATGTCATTGCCAATTGA 723 0.4302 MVAPSIGILDSVGVSAVETQEEVRRGPKDIFGAGTDTSATVLEWVMSELLKNPRVMKKAQAEIREAFRGKKTIRESDIYQLSYLKSVIKETLRLHPPAPLLLPRECREPCKIGGYEIPIKTKVIVNAWALGRDPKHWYDAEKFMPERFDGTGYDFKGNNFEYIPFGAGRRMCPGILLGLANVELPLAALLYHFDWELPNGMKPEDLDMTEAFGAAVARKNNLYLIPTPYDYSLHHHVIAN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00105 240 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 165 174 IPR017972 GO:0005506|GO:0016705
Pumo4g00105 240 FunFam Predicted protein 31 224 - -
Pumo4g00105 240 PRINTS P450 superfamily signature 33 50 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS P450 superfamily signature 163 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS P450 superfamily signature 86 97 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 Pfam Cytochrome P450 19 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 Gene3D Cytochrome P450 16 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PANTHER OS08G0105600 PROTEIN 20 230 - -
Pumo4g00105 240 SUPERFAMILY Cytochrome P450 19 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS E-class P450 group I signature 162 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS E-class P450 group I signature 42 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS E-class P450 group I signature 85 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS E-class P450 group I signature 126 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS E-class P450 group I signature 172 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00105 240 PRINTS E-class P450 group I signature 22 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00105 Pumo-Chr4 1391710 1395060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00105 19 229 Cytochrome P450 AT3G26300 53.555 1.32e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00105 - K15472 gmx:100794503 402.519