Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00103 ATGGAATTCCATCCTTCCTTCCTGGTTATTACCTCATTCCTCTTGTTGCTGCTTCTTTGGCTTGCAAGGAACTACAACCAGAAAATCAAAGACATATTCGGGGCTGGGACTGATACTTCAGCAACAGTAATAGAGTGGGCTATGTCAGAGCTGTTGAAAAACCCAAGAGTGATGAAAAAGGCACAGGCTGAAATAAGAGAAGCCTTTAGGGGAAAGAAAACAATTCGCGAGAGTGATGTATATGAACTTAACTACTTGAAGTCAGTGATCAAAGAAACCATGAGGTTACATCCACCTGTTCCTTTGTTGCTCCCAAGAGAATGCAGGGAACCATGCAAGATAGGTGGATATGAAATACCTATCAAGACTAAAGTGATTGTAAATGCATGGTCTCTTGGGAGAGATCCCAAGCATTGGTATGATGGAGAGAAGTTTATACCTGAGAGGTTTGATGGCACAGGTTTTGATTTTAAAGGGAATAATTTTGAGTACATCCCTTTTGGGGCAGGAAGGAGAATATGTCCTGGCATTTTGCTTGGCATAGCTAATGTTGAGCTCCCTCTGGCTGCATTGCTGTATCACTTTGACTGGGAACTCCCCAATGGAATGAAACCAGAGGACTTGGATATGACTGAATCCTTTGGAGCTGCAGTGGGAAGGAAAAACAACCTATATTTGATACCTACTATGTATGACCATTCCCTTAATCATGTCATTGTCAATTGA 726 0.4187 MEFHPSFLVITSFLLLLLLWLARNYNQKIKDIFGAGTDTSATVIEWAMSELLKNPRVMKKAQAEIREAFRGKKTIRESDVYELNYLKSVIKETMRLHPPVPLLLPRECREPCKIGGYEIPIKTKVIVNAWSLGRDPKHWYDGEKFIPERFDGTGFDFKGNNFEYIPFGAGRRICPGILLGIANVELPLAALLYHFDWELPNGMKPEDLDMTESFGAAVGRKNNLYLIPTMYDHSLNHVIVN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00103 241 PRINTS P450 superfamily signature 165 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS P450 superfamily signature 35 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS P450 superfamily signature 88 99 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS E-class P450 group I signature 24 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS E-class P450 group I signature 128 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS E-class P450 group I signature 164 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS E-class P450 group I signature 87 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS E-class P450 group I signature 44 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PRINTS E-class P450 group I signature 174 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 Gene3D Cytochrome P450 22 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 PANTHER OS08G0105600 PROTEIN 29 232 - -
Pumo4g00103 241 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 167 176 IPR017972 GO:0005506|GO:0016705
Pumo4g00103 241 Pfam Cytochrome P450 24 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 SUPERFAMILY Cytochrome P450 29 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g00103 241 FunFam Predicted protein 33 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00103 Pumo-Chr4 1383475 1385153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00103 21 231 Cytochrome P450 AT3G26300 53.774 5.11e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00103 - - gmx:100794503 409.838