Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00079 ATGTTCCTTTCTTTAAAAAGTGTTTTAGTCTCTATCTCAGCTGCATGTTTTCTGTTGTGGTGGTGTTGGTTAATAGATATTTGTCATGTTTTTAGCAGTAAGATGGATGAACAATTGAGGGTACTAAAAGTCATTGTGGTGCAAGGGAAAAGATTAGTGATCCGGGATTTCAAGAGCAGTGACCCTTATGTTGTTGTCAAGCTGGGGAATCAGACAGCAAAGACCAGGGTCATTCATTGTTGCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTTTGACAGAACCTTTGGGAGTTCTGAATTTGGAAGTATTTGACAAAAATCTTTTGAAGGCTGATGACAAGATGGGAAATACATACCTAAACCTTCAACCATTAATCTCTGCAGGCAGATTAAGAGAAATTTTAAAGGTGTCCTCTGGTGAGTCAACATTGAGGAAGGTGACACCGGATAGTGAAAATTGTCTAGCCCGAGAAAGCAGTATCAATTGTGTTAATGGTGAAGTGGTACAAAATGTTTGGTTAAGGCTTCGTGGGGTTGAGTCTGGGGAACTACAATTGACCATCAAATTGATCTCTTCTACTTCTGCTGCTTCCTCAAAATAG 609 0.3941 MFLSLKSVLVSISAACFLLWWCWLIDICHVFSSKMDEQLRVLKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTRVIHCCLNPVWNEELNFTLTEPLGVLNLEVFDKNLLKADDKMGNTYLNLQPLISAGRLREILKVSSGESTLRKVTPDSENCLARESSINCVNGEVVQNVWLRLRGVESGELQLTIKLISSTSAASSK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00079 202 Pfam C2 domain 42 132 IPR000008 -
Pumo4g00079 202 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 38 195 IPR044562 -
Pumo4g00079 202 CDD C2_ArfGAP 41 184 - -
Pumo4g00079 202 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 193 IPR035892 -
Pumo4g00079 202 Gene3D C2 domain 24 150 IPR035892 -
Pumo4g00079 202 ProSiteProfiles C2 domain profile. 23 137 IPR000008 -
Pumo4g00079 202 SMART C2_3c 41 136 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00079 Pumo-Chr4 1155574 1157505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00079 30 191 C2H2 Transcription Factor Family AT4G05330 40.123 1.48e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00079 - - gmx:100798217 303.523