Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00075 ATGGACATGGACAACTACGGGCATAGAAGCACCAGCGTGTGTGAGATAGAAGAAGTGGACGACAACGAGACCCAACTACATGATGCCACCAATAATATTCACGGGGAACAAGATCAAGAAGACTGTGTTTATGTAGCAGTGTGTAAGAGCGACACAAGCATGGACGCTCTCTCATGGACACTCAACAACTTGGTTACTCAATCTACCATCATTTATCTCATACATGTATTCCCTGAGATCAAGCACATTCCAAATCCATTGGGAATAGGAATGATTCCAAGGAATCAAGTGAGTGCTGAGCAGGTGGAGAGTTATATTGACCAAGAAAGAGGCAAAAGGAGAGAGCTCCTTCAGAAATTCCTACAATCATGCTCTACTTCCAAGGTTAATGTAGACACCATTCTGATTGAGAGTGACTTAGTTGCAAAGGCTATCCTCGACCTGATTCCCATTCTTCAAATAAGAAATCTAGTGATTGGAGCCAACAAAATCCATCTAAGAAAATCAAAATCAAGGAAAGGGAATAGCATAGTCGATCAGATACTGCAGAATGCACCACAAAGTTGCAAGGTATGGCGTTTCCTTGACAATAATGTTTACGTGTGA 606 0.4191 MDMDNYGHRSTSVCEIEEVDDNETQLHDATNNIHGEQDQEDCVYVAVCKSDTSMDALSWTLNNLVTQSTIIYLIHVFPEIKHIPNPLGIGMIPRNQVSAEQVESYIDQERGKRRELLQKFLQSCSTSKVNVDTILIESDLVAKAILDLIPILQIRNLVIGANKIHLRKSKSRKGNSIVDQILQNAPQSCKVWRFLDNNVYV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00075 201 Gene3D HUPs 30 193 IPR014729 -
Pumo4g00075 201 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 6 192 - -
Pumo4g00075 201 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 43 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00075 Pumo-Chr4 1126733 1128869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00075 52 192 Plant U-box Gene Family AT5G57035 29.078 4.97e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00075 - - gmx:100527773 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00075 4 1126733 1128869 Pumo2g00236 2 4484923 4487012 PCT