Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00051 ATGGCAAGCGCAGGTTTTGGTAAAGAAGAAGATAATAATAAACTGACGCTGTATTCGTATTGGAGGAGCTCTTGTTCTCACCGAGTCCGAATCGCTCTCAACCTCAAAGGGCTCAAATACGAGTACAAGCCCGTCAATCTGTTGAAGGGAGAGCAATCTCGCCCCGAGTTTCTCCAGCTCAACCCTGTTGGTTGTGTTCCCGTTCTACTGGATGCCCACGTTGTTCTCTATGACTCTTTCGCCATTATTATGTATTTGGAAGATAAATATCCTCACAATCCTTTGCTCCCGCTCCCTCATGATATTCATAAAAGAGCAATCAATTTCCAGGCTGCCACTATTGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTAGTGAAGTACATAGGGGAAAAAGTTGGCCCTGATGAAAAACTTCCTTGGACCCAAAGTGTAATAGGAAAAGGCTTCCTGGCACTTGAAAAACTATTGAAAGACCATGCAAGAAGATATGCAACTGGAGATGAAATTTTACTGGCAGATTTGTTTTTAGCACCTCAGTTAGATGCAGCAATCAGGAGATTCAACGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACACGAGACATATAATGAAATCCCAGCATTTCGGAAGGCTTTGCCAGAGAACCAGCCAGATGCAGTTGGAAATATTGCAGCAGGAGGAGCGACTGATTCGGCATCATTAGTTTCTCTTGCAATAAGCTTGCTAGTCACAGCTCTGGTGTCTCTTACAAGTACCTGGCAGAATAAACCTCTCAATTGGAAGGGATCAACAGATCCTTGTAATGATTGTTGGGATGGAATCAAGTGCATCAAGTCACGTGTTACTTCCATAAGATTAACGGGCTTGGATATAAAAGGCGAGCTTTCAGAAGATATTAGGTTGCTGTCTGAATTGGAGACACTAGACCTCTCACACAATAAGGGGTTAACTGGTTCACTTCCACGTTCAATTGGAAATTTGACCAAGCTGTCAAACTTATTTCTTGTTGGTTGTGGTTTCACTGGTCCTATTCCAGATGAAATAGGATCCCTTAAGGAGCTGGTCTTCTTATCTTTAAATTCTAACAGCTTCAGTGGACGAATTCCGGCTTCTATTGGTAATCTATCAAAACTTAATTGGTTAGATATAGGTGACAATCAGCTCGAAGGACCCATTCCCATATCAAGTGGCAGTACACCTGGTCTTGATATGCTTCTCAGTACCAAACACTTTCATTTTGGGAAGAATAAGCTTTCAGGCATTATTCCTGCACAACTTTTTAGCTCGGAAATGACTCTTATACATTTGCTTTTTGAAAACAATGAATTTGAGGGCAACATTCCTTCTACTCTTGGAATTGTTCAGAGTCTAGAGGTGGTGCGCCTTGATGGCAACTTGTTAAGTGGACATGTGCCTCTCAACATCAACAATCTTACTCACGTCAATGAGCTGTACTTGCTCAACAATAAGCTGTCGGGCCCCCAGCCAAACCTTGAGGGAATGAACCAACTCAGCTACTTGGATATGAGCAACAATAGTTTTGATGAATCGGATTTTCCAGCATGGATTTCGACTCTTAAATCTTTGTCAACACTAAAGATGGAAAACACAGGACTTCAAGGGCAGATTCCTGATTCTTTGTTTAGCCTTTCCAAGTTAAAGAACGTGATACTAAAAGACAATAGAATCAGTGGAAGCCTGGACATTGGCAACACATACAGCAAGCAACTCCAACTCATTGATCTGCAGAACAATAGAATTGAAGACATCAAGCAAGAAGACATGGTACCCTCCAGTGTCAAGATAATACTTGTCCATAATCCAGTTTGCGAGGAATCAGGAGTGACAAAGAGTTACTGCTCCAACCCCAACCCAGAGGTGAGTGTACCATCGACAACAACAAAGAATTGTGAGCCTGCTACCTGCAGTTCAGGTCAGGTTTTCAGCGCCCACTGCAAATGCTCATATCCATACACAGGAATTTTAAGGTTCAGAACACCTTCTTTCTGGGACTGGTGGAATGAAACCTCCCTCCAGGAACATCTGATGCATACTTTTCAGTTTTGTAATCTACCTGTGGATTCAGTTTCCTTGAGCACTCGTGATAACTCTCAGTATCTTGAATTCACCTTACAAATCTTCCCATCAAACCGTGATTATTTCAACCAAGCAGATATTCTGAGCATTTGTTCTGCACTAAGCAACTTGACTATGGATGCATTTTATTTTTATCCTGATGAATATGAACACTATGAAGAACTTGCTGAGTCAAGTAAGTCATCAAATTCAGACTTCATAATTAGAGCAGCAATTGGTGGTGGTTCAGCCCTGCTTGTGTTAATACTCCTCGCAGGTGCTTATGCTTTATGGCTAAAGAAAAAGGCAGAAAAAGCAATCCAACAAAATTATCCTTTTGGAAGTGGGGACCCGAGTGACAGCAATAGTAGCATCCCTCAGTTAAAAGGGGCAAGGAGATTCTCTTTTGAAGAGCTTCAGAAATACACCAACAAATTTTCGCAAGATAATGATATTGGATCCGGGGGCTATGGAAAGGTTTATCGGGGAATTCTACCCAATGGGCAACTCATAGCCATAAAACGAGCTCAAAAAGAATCTATGCAGGGAGGGCTCCAGTTTAAAGCTGAGGTTGAGCTTCTATCAAGGGTCCACCATAAGAATCTTGTTAGCCTTGTGGGTTTCTGTTTTGAGCGAGGAGAGCAAATTCTGGTGTATGAGTATGTTTCAAATGGAAGTTTAAAGGATGCTATCTTAGGGAAATCAGTAATTAGGTTGGACTGGATTAGACGACTAAAAATAGCACTTGATATTGCAAGGGGCTTGGATTATCTTCATCAACATGCCAATCCTCCTATCATCCACAGGGACATCAAATCAGGCAACATTTTGCTGGACGAGCGTTTGAATGCTAAAGTTGCTGATTTTGGTCTTTCCAAGATGGTTGATTTTGGAAAGGATCATGTTACCACTCAAGTAAAAGGGACGATGGGATACTTGGATCCAGAGTATTACACAAGTCAACAATTGACAGAGAAGAGTGATGTTTATAGCTATGGAGTGCTAACGTTGGAGTTGATAACTGCAAAAAGACCAATAGAACGAGGGAAGTATATTGTGAAGGTGGTTAGGAAAGAAATTGATAAGACGAAAGATTTATATGGTCTTGAGAAAATTCTGGACCCAACCATTGGTCTAGGGTCAACATTGAAGGGTTTTGAGATGCTTGTGGATCTTGCAATGAAGTGTGTTGAAGATTCACGTGCTGACAGGCCTACAATGAATGATGTGGTGAAAGAAATTGAAAACGTGTTGGTGTCATCTGGTTTGAACTGCTCAGCTGAATCAACTTCATCTAGCTATGACGAGGTAAGTGTGCAATTCTCACCATCCCTACATCAATGA 3435 0.4143 MASAGFGKEEDNNKLTLYSYWRSSCSHRVRIALNLKGLKYEYKPVNLLKGEQSRPEFLQLNPVGCVPVLLDAHVVLYDSFAIIMYLEDKYPHNPLLPLPHDIHKRAINFQAATIVSSSIQPFQNYTVVKYIGEKVGPDEKLPWTQSVIGKGFLALEKLLKDHARRYATGDEILLADLFLAPQLDAAIRRFNVDMKEFPTLSRLHETYNEIPAFRKALPENQPDAVGNIAAGGATDSASLVSLAISLLVTALVSLTSTWQNKPLNWKGSTDPCNDCWDGIKCIKSRVTSIRLTGLDIKGELSEDIRLLSELETLDLSHNKGLTGSLPRSIGNLTKLSNLFLVGCGFTGPIPDEIGSLKELVFLSLNSNSFSGRIPASIGNLSKLNWLDIGDNQLEGPIPISSGSTPGLDMLLSTKHFHFGKNKLSGIIPAQLFSSEMTLIHLLFENNEFEGNIPSTLGIVQSLEVVRLDGNLLSGHVPLNINNLTHVNELYLLNNKLSGPQPNLEGMNQLSYLDMSNNSFDESDFPAWISTLKSLSTLKMENTGLQGQIPDSLFSLSKLKNVILKDNRISGSLDIGNTYSKQLQLIDLQNNRIEDIKQEDMVPSSVKIILVHNPVCEESGVTKSYCSNPNPEVSVPSTTTKNCEPATCSSGQVFSAHCKCSYPYTGILRFRTPSFWDWWNETSLQEHLMHTFQFCNLPVDSVSLSTRDNSQYLEFTLQIFPSNRDYFNQADILSICSALSNLTMDAFYFYPDEYEHYEELAESSKSSNSDFIIRAAIGGGSALLVLILLAGAYALWLKKKAEKAIQQNYPFGSGDPSDSNSSIPQLKGARRFSFEELQKYTNKFSQDNDIGSGGYGKVYRGILPNGQLIAIKRAQKESMQGGLQFKAEVELLSRVHHKNLVSLVGFCFERGEQILVYEYVSNGSLKDAILGKSVIRLDWIRRLKIALDIARGLDYLHQHANPPIIHRDIKSGNILLDERLNAKVADFGLSKMVDFGKDHVTTQVKGTMGYLDPEYYTSQQLTEKSDVYSYGVLTLELITAKRPIERGKYIVKVVRKEIDKTKDLYGLEKILDPTIGLGSTLKGFEMLVDLAMKCVEDSRADRPTMNDVVKEIENVLVSSGLNCSAESTSSSYDEVSVQFSPSLHQ 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00051 1144 ProSiteProfiles Protein kinase domain profile. 843 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00051 1144 Gene3D - 99 226 - -
Pumo4g00051 1144 SUPERFAMILY Protein kinase-like (PK-like) 817 1114 IPR011009 -
Pumo4g00051 1144 CDD GST_C_Zeta 103 221 IPR034330 -
Pumo4g00051 1144 Gene3D Glutaredoxin 12 98 - -
Pumo4g00051 1144 Pfam Glutathione S-transferase, N-terminal domain 17 94 IPR004045 -
Pumo4g00051 1144 Gene3D Phosphorylase Kinase; domain 1 814 918 - -
Pumo4g00051 1144 SUPERFAMILY L domain-like 280 621 - -
Pumo4g00051 1144 FunFam Glutathione S-transferase Z1 13 97 - -
Pumo4g00051 1144 ProSitePatterns Protein kinases ATP-binding region signature. 849 871 IPR017441 GO:0005524
Pumo4g00051 1144 FunFam Leucine-rich repeat family protein 248 402 - -
Pumo4g00051 1144 Gene3D Transferase(Phosphotransferase) domain 1 919 1132 - -
Pumo4g00051 1144 CDD GST_N_Zeta 15 87 IPR034333 -
Pumo4g00051 1144 SMART serkin_6 843 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00051 1144 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 13 94 IPR004045 -
Pumo4g00051 1144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672|GO:0006468
Pumo4g00051 1144 SFLD Glutathione Transferase (cytosolic) 15 206 IPR040079 -
Pumo4g00051 1144 SUPERFAMILY Thioredoxin-like 12 97 IPR036249 -
Pumo4g00051 1144 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 101 226 IPR010987 -
Pumo4g00051 1144 Pfam Glutathione S-transferase, C-terminal domain 141 213 IPR004046 -
Pumo4g00051 1144 FunFam Maleylacetoacetate isomerase 100 227 - -
Pumo4g00051 1144 Gene3D Ribonuclease Inhibitor 502 649 IPR032675 -
Pumo4g00051 1144 Pfam Protein kinase domain 844 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00051 1144 PANTHER RECEPTOR-LIKE PROTEIN 55 254 1113 - -
Pumo4g00051 1144 SFLD Main (cytGST) 15 206 - -
Pumo4g00051 1144 FunFam Leucine-rich repeat protein kinase family protein 812 918 - -
Pumo4g00051 1144 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 919 1128 - -
Pumo4g00051 1144 Gene3D Ribonuclease Inhibitor 402 501 IPR032675 -
Pumo4g00051 1144 Gene3D Ribonuclease Inhibitor 245 401 IPR032675 -
Pumo4g00051 1144 FunFam Leucine-rich repeat protein kinase family protein 403 502 - -
Pumo4g00051 1144 SUPERFAMILY GST C-terminal domain-like 98 223 IPR036282 -
Pumo4g00051 1144 CDD STKc_IRAK 849 1113 - -
Pumo4g00051 1144 ProSiteProfiles Leucine-rich repeat profile. 581 602 IPR001611 GO:0005515
Pumo4g00051 1144 NCBIfam maleylacetoacetate isomerase 16 224 IPR005955 GO:0003824|GO:0005737|GO:0009072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00051 Pumo-Chr4 854097 874667 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00051 237 1130 Receptor kinase-like Gene Family AT5G49760 55.482 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pumo4g00051 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00051 - - gmx:100811702 1108.98