Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00046 ATGAGCAAAAGAGTATTAGTAGTTCTGCTGCTTGTTTTGAATTATGTGTTGGTTGCAGAAGGAGAAACAGCTGATGGAGATTGGACCACACTTTTGTCTCTTAAGGATACCTGGAAGAACACCCCTCCTAATTGGGTGGGTTCAGATCCTTGTGATGATTGGGATGGAATCAAGTGCAAGAATACACGCATTACATCAATAACATTATCAAGCACTGGTTTGGTTGGTCAGCTTTCTGGAGATATTGGATCACTATCTGAATTAGAGACTTTGGATCTATCTTACAACAAGGACTTGACTGGACCACTTCCAGAATCCATTGGGGAATTGAAGAAGCTGTCAACCTTAATTCTTGTTGGTTGTAGCTTCAATGGTCCTATTCCAGACAGCATAGGAAATCTGCAGGAGCTCCTCTTCTTATCTTTAAATTCCAATAGCTTTAGTGGACCAATTCCTCATTCTATTGGTAATCTATCAAAGCTTTATTGGTTGGATTTAGCTGACAATCAACTTCAAGGGAACATCCCGGTATCTAGTGGCGACATATCTGGTCTTGATAAGTTACACCATGCCAAGCATTTTCATCTTGGGAAGAATAATCTATCAGGCAGTATTCCTCCTCAACTTTTTAGCTGGGAAATGGCTCTGATTCATCTGCTTTTGGAAAGCAATCAACTCACTGGCAACATTCCACCTACGCTTGGACTAGTTCAGAGTCTGGAGGTGGTGCGCTTAGATAGTAATTCATTAAGTGGACCTGTGCCTCCAAACATCAACAATCTTACGCATGTTCAAGATCTGTACTTGTCCAACAATAAACTGACAGGCTCCCTGCCAAACCTTACTGGAATGAATGCCCTCAGCTACCTGGACATGAGCAACAATAGTTTTAAACCATTGGATTTTCCAGGATGGTTTTCAACTCTTAAGTCCTTAACAACATTAAAGATGGAGAGAACACAACTTCAAGGACAGGTTCCTACTTCTTTGTTTACACTTGTCAATTTACAGACTGCGGTGCTAAAAGACAACAAAATAAATGGAACCTTGGATATCGGCTCCTCCTACAGTAATCAGCTGCGACTTGTTGATTTGGAGACTAATTCAATTGACAGCTTTGAGCAAAAAGATGGAGTTTCCAATGTCAAGATCAAGATAATACTCAAAGATAATCCAATTTGCCAAGAAAATGGAGAAGTAGAAAGCTACTGCTCCTCTTCTCAACCCAATGTCTCATATTCAACACCACCAAATAAATGTCAACCTGGTACCTGCAGTTCAGAACAGATTCCTAGTCCCAACTGTATATGCGCATATCCATACTCGGGAACCTTAACTTTCAGGTCACCTTCCTTTTCGGACTTTGATAACAAAACTTACTACTTAATGCTCGAGGAGGGTCTTATGCAGTCTTTTAAGTCTCATTTCCTACCTGTGGATTCGGTTTTGTTGAGCCATCCAAGTAAGGATTCAACTCAGTATCTCCAATTGAGCTTACAAGTCTTCCCATCAGGAAAGGATCGTTTCAATCGAACAGGGACTTTTAGCATTGGTTTTCTTCTAAGCAACCAGACTTTTAAGCCTCCTAAAGTTTTTGGACCATTTTATTTTCTTGGAGATAAATATGAACACTTTGGGAACTCTGAAGGATTGCCTGAATCGAGTAAATCTTCAAACATTGGAATCATAATTGGGGCAGCAGTTGGTGGTTCAGTCTTGCTAGTGTTATTACTCCTAGCTGGTCTTTATGCTTTCCGCCAAAAGAAAAGAGCCGAAAAAGCGATTGGCCAAAGCAATCCTTTTAGACGCTGGGATACAGTTGAGAGCAACAGTGATGTCCCTCAGTTGAAAGAAGCAAGGATGTTTTCTTTTGAAGAGCTTAAAAAATACACCAAAAATTTTTCTCAAGTCAATGACCTTGGATCTGGGGGTTTTGGGAAGGTTTATAAGGGAACCCTTCCCAATGGACAAGTGATAGCAATAAAACGAGCTCAAAAAGAATCTATGCAGGGAAAGCTTGAGTTTAAAGCGGAGATTGAGCTCCTATCAAGGGTTCACCATAAGAATCTTGTCAGCCTTGTGGGATTCTGCTTTGAGCACGAAGAACAAATGCTGGTTTATGAGTATGTTCAAAATGGAAGTTTAAAGGACGCTCTCTCAGGGAAGTCAGGAATTAGATTAGATTGGATTAGAAGGCTAAAAGTTGCCCTTGGTATTGCCCGGGGTTTGGCTTATCTTCACGAACTTGTTAATCCTCCCATCATACATAGGGACATCAAATCAAACAATATTTTGCTCGATGACCGCCTAAATGCCAAAGTTGCTGATTTTGGTCTCTCCAAGTCTATGGTTGATTCTGAAAAAGATCATGTCACCACTCAAGTTAAAGGAACAATGGGTTACTTGGATCCAGAGTATTATATGTCTCAACAGCTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATATCTGCAAGAAGGCCATTGGAACGAGGGAAGTATATTGTGAAAGAGGTTAGGAATGCACTTGATAAGACAAAAGGGTTATATGGTCTTCATGAAATTATTGACCCAGCCATTGGTTTGGCGTCCACACTGAGCTGTTTTGACAAGTTTGTGGACATGACCATGACATGTGTTGAAGAAGCAGGTTCTGACAGGCCTAAAATGAGTGATGTGGTAAGAGAAATAGAAAACATCTTGAAGTCAGCTGGTGCAAACCCGACTGAGGAATCACCCTCCATCTCTTCTAGTTATGAGGAGGTCAGCAGAGGGAGTTCCAGCCATCCTTATAATAGCAACGACACCTTTGATTTGAGTGCAGGACTTCCATATCCAAAAGTTGACCCTAAGTAG 2874 0.4095 MSKRVLVVLLLVLNYVLVAEGETADGDWTTLLSLKDTWKNTPPNWVGSDPCDDWDGIKCKNTRITSITLSSTGLVGQLSGDIGSLSELETLDLSYNKDLTGPLPESIGELKKLSTLILVGCSFNGPIPDSIGNLQELLFLSLNSNSFSGPIPHSIGNLSKLYWLDLADNQLQGNIPVSSGDISGLDKLHHAKHFHLGKNNLSGSIPPQLFSWEMALIHLLLESNQLTGNIPPTLGLVQSLEVVRLDSNSLSGPVPPNINNLTHVQDLYLSNNKLTGSLPNLTGMNALSYLDMSNNSFKPLDFPGWFSTLKSLTTLKMERTQLQGQVPTSLFTLVNLQTAVLKDNKINGTLDIGSSYSNQLRLVDLETNSIDSFEQKDGVSNVKIKIILKDNPICQENGEVESYCSSSQPNVSYSTPPNKCQPGTCSSEQIPSPNCICAYPYSGTLTFRSPSFSDFDNKTYYLMLEEGLMQSFKSHFLPVDSVLLSHPSKDSTQYLQLSLQVFPSGKDRFNRTGTFSIGFLLSNQTFKPPKVFGPFYFLGDKYEHFGNSEGLPESSKSSNIGIIIGAAVGGSVLLVLLLLAGLYAFRQKKRAEKAIGQSNPFRRWDTVESNSDVPQLKEARMFSFEELKKYTKNFSQVNDLGSGGFGKVYKGTLPNGQVIAIKRAQKESMQGKLEFKAEIELLSRVHHKNLVSLVGFCFEHEEQMLVYEYVQNGSLKDALSGKSGIRLDWIRRLKVALGIARGLAYLHELVNPPIIHRDIKSNNILLDDRLNAKVADFGLSKSMVDSEKDHVTTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVLMLELISARRPLERGKYIVKEVRNALDKTKGLYGLHEIIDPAIGLASTLSCFDKFVDMTMTCVEEAGSDRPKMSDVVREIENILKSAGANPTEESPSISSSYEEVSRGSSSHPYNSNDTFDLSAGLPYPKVDPK 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00046 957 PANTHER RECEPTOR-LIKE PROTEIN 55 35 907 - -
Pumo4g00046 957 MobiDBLite consensus disorder prediction 911 945 - -
Pumo4g00046 957 Gene3D Phosphorylase Kinase; domain 1 605 709 - -
Pumo4g00046 957 FunFam Leucine-rich repeat protein kinase family protein 181 280 - -
Pumo4g00046 957 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Pumo4g00046 957 Gene3D Ribonuclease Inhibitor 181 280 IPR032675 -
Pumo4g00046 957 MobiDBLite consensus disorder prediction 907 957 - -
Pumo4g00046 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Pumo4g00046 957 ProSitePatterns Protein kinases ATP-binding region signature. 640 662 IPR017441 GO:0005524
Pumo4g00046 957 Gene3D Transferase(Phosphotransferase) domain 1 710 928 - -
Pumo4g00046 957 SUPERFAMILY L domain-like 58 406 - -
Pumo4g00046 957 ProSiteProfiles Protein kinase domain profile. 634 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00046 957 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 710 919 - -
Pumo4g00046 957 Gene3D Ribonuclease Inhibitor 281 428 IPR032675 -
Pumo4g00046 957 SUPERFAMILY Protein kinase-like (PK-like) 620 936 IPR011009 -
Pumo4g00046 957 SMART serkin_6 634 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00046 957 FunFam Leucine-rich repeat family protein 26 180 - -
Pumo4g00046 957 FunFam Leucine-rich repeat protein kinase family protein 600 709 - -
Pumo4g00046 957 CDD STKc_IRAK 640 906 - -
Pumo4g00046 957 Pfam Protein tyrosine and serine/threonine kinase 637 902 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00046 Pumo-Chr4 753491 760338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00046 1 957 Receptor kinase-like Gene Family AT5G49760 55.659 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pumo4g00046 PK_Tyr_Ser-Thr 4.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00046 - - gmx:100811702 1714.51