Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00036 ATGGAAGGAGTACCGCACCCAATACCCAGAACAGTCGAAGAGGTTTTCACCGATTTTAAGGGCAGACGTGCTGGTTTGATTAAGGCCCTCACTACCGATGTTGAAAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAATTTGTGTCTATATGGGTTTCCAAATGAAACATGGGAAGTGAATTTGCCTGTTGAGGAAGTGCCTCCTGAACTCCCTGAGCCAGCATTAGGTATAAATTTTGCCAGGGATGGCATGCAAGAGAAGGACTGGCTATCACTGGTTGCAGTTCACAGTGACTCATGGCTGCTTGCTGTTGCTTTCTATTTTGGTGCCCGCTTTGGATTTGGTAAGAATGAAAGGAAAAGGCTTTTTCAGATGATAAATGATCTGCCAACTATCTTCGAACTTGTGACAGGAAGTGCTAAGCAATCAAAGGATCAACCAGCTGCTCACAACAATGGTAGCAAATGCAAATCAAGTGGAAAGGTGGTATTCAGTTTTCAATTATTTCTTAGTTTACATTTCTATCTCTGCCCTTATGAGGAAAGTCACTTTGGTCTTCCTGTTTTGGATGCTTCCTTTTAA 585 0.4291 MEGVPHPIPRTVEEVFTDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFELVTGSAKQSKDQPAAHNNGSKCKSSGKVVFSFQLFLSLHFYLCPYEESHFGLPVLDASF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00036 194 PANTHER CPG BINDING PROTEIN 9 162 IPR045104 GO:0006355|GO:0042393
Pumo4g00036 194 Pfam Alfin 11 138 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00036 Pumo-Chr4 614988 620261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00036 1 191 Alfin-like Transcription Factor Family AT2G02470 75.897 1.55e-92 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00036 K26274 - gmx:100807826 319.701