Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00005 ATGATACAAAAGGGAAGTTCAGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCATGTTATAAATGCCTTGGCTAAACCAATTGATGGTCGAGGAGAAATTTCAGCTTCAAAATCTCGATTAATCGAATCTTCCGCTCCCGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTCAAAACAGGACTTATTGCTATTGATTCGATGATCCCCATAGGATGTGGCCAGCGAGAATTAATTATTGGAGACAGACAAATGGGTAAAACAGTAGTAGCCACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTTTTTATGTAGTTGTTGGTCAAAAAGCATCTTTTGTGGCTCAAGTTGTGACTACCTTACAAGAAAGAGGAGCAATGGAATACACTATTGTGGTAGCTGAAATAGCGGATTCTCCAGCTACATTACAATACCTCGCCCCTTATACAGGAGCAGCTTTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATAATTTATGATGATCTCTCCAAACAAGCACAAGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCTGGTCGCGAAGCTTATCCGGGGGATGTTTTTTATTTACATTCGCATCTTTTGAAAAGGGCGGCTAAATTAAGTTCTCAGTTAGGCGAAGGAAATATGACTGCTTTACCAATAGTTGAAACTCAATCAGGTGATGTTTCGACTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATCTGCCGATCTATTCAATGTTGGAATCAGACCCGCTATTAATGTCGGTATTTCCGTTTCCAAAGTTGGATCGGCGGCTCAAGTTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTGGAAGTAGCATAA 924 0.3896 MIQKGSSVKATGRIAQIPVSEAYLGHVINALAKPIDGRGEISASKSRLIESSAPGIISRRSVYEPLKTGLIAIDSMIPIGCGQRELIIGDRQMGKTVVATDTILNQQGQNVICFYVVVGQKASFVAQVVTTLQERGAMEYTIVVAEIADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSHLLKRAAKLSSQLGEGNMTALPIVETQSGDVSTYIPTNVISITDGQIFLSADLFNVGIRPAINVGISVSKVGSAAQVKAMKQVAGKLKLEVA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00005 307 FunFam ATP synthase subunit alpha 14 291 - -
Pumo4g00005 307 CDD F1-ATPase_alpha_CD 14 287 IPR033732 GO:0032559
Pumo4g00005 307 ProSitePatterns ATP synthase alpha and beta subunits signature. 275 284 IPR020003 GO:0005524
Pumo4g00005 307 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 2 307 IPR005294 GO:0015986|GO:0045261|GO:0046933
Pumo4g00005 307 NCBIfam F0F1 ATP synthase subunit alpha 2 307 IPR005294 GO:0015986|GO:0045261|GO:0046933
Pumo4g00005 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 290 IPR027417 -
Pumo4g00005 307 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 69 284 IPR000194 GO:0005524
Pumo4g00005 307 Gene3D - 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00005 Pumo-Chr4 197997 198920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00005 3 297 Primary Pumps ATPases(2) AT4G38510 27.564 1.27e-27 110