Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03736 ATGAGGTTCCCTATCCTAAACGGGTTCTATTTGGACAGATCTGTTGGATCAAGAGAGCTTTATCAAGGTGAACACAAGGGTACAAGAGAGGTAAGGCTGTCCACTAAAATCCTTTGGATGAGGAGAATGTGTGTGCTCAGACGCTTGCTTCGCAAGTGCAGGGAATCTAAGAAGATTGATAATCACATGTACCATGATATGTACATGAAGGTTAAGGGTAATGTTTTCGAGAACAAGAGGGTTTTAATGGAGAGCATACTCAAGTCCAAAGCACCCACATAG 282 0.4255 MRFPILNGFYLDRSVGSRELYQGEHKGTREVRLSTKILWMRRMCVLRRLLRKCRESKKIDNHMYHDMYMKVKGNVFENKRVLMESILKSKAPT 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03736 93 Pfam Ribosomal protein L19e 18 89 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pumo3g03736 93 SUPERFAMILY Ribosomal protein L19 (L19e) 18 87 IPR035970 GO:0003735|GO:0005840|GO:0006412
Pumo3g03736 93 PANTHER 60S RIBOSOMAL PROTEIN L19 18 91 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pumo3g03736 93 Gene3D - 11 93 - -
Pumo3g03736 93 SMART Ribosomal_L19e_2 12 90 IPR000196 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03736 Pumo-Chr3 79094693 79097640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03736 23 91 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 82.609 1.37e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03736 K02885 - gmx:100499920 110.923