Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03732 ATGGCAAAACCTATATCTAAAACGGGTTCGCGTAAAAATGTACGTATTGGTCCGCGTAAGCATACTCGGAAAATACCAAAGGGAGTTATTCATGTTCAAGCTAGTTTCAACAATACTATTGTGACTGTTACAGATGTACGAGGTCGGGTGATTGCTTGGTCCTCCGCCGGTACTTGTGGATTCAAGGGTACACGAAGGGGGACACCTTTTGCCGCTCAAACTGCAGCAGGAAATGCTATTCGAACAGTATCGGATCAAGGCATGCAACGAGCAGAAGTCATGATAAAAGGTCCTGGTCTCGGAAGAGATGCGGCATTAAGAGCTATTCGTAGAAGTGGTATACTATTAAATTTTATACGAGATGTAACTCCTATGCCACATAATGGATGTAGGTCTCCTAAAAAAAGACGTGTGTAA 417 0.4317 MAKPISKTGSRKNVRIGPRKHTRKIPKGVIHVQASFNNTIVTVTDVRGRVIAWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVSDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFIRDVTPMPHNGCRSPKKRRV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03732 138 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 13 136 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo3g03732 138 MobiDBLite consensus disorder prediction 1 21 - -
Pumo3g03732 138 SUPERFAMILY Translational machinery components 23 138 - -
Pumo3g03732 138 ProSitePatterns Ribosomal protein S11 signature. 106 128 IPR018102 -
Pumo3g03732 138 Pfam Ribosomal protein S11 28 137 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo3g03732 138 Hamap 30S ribosomal protein S11 [rpsK]. 3 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo3g03732 138 NCBIfam 30S ribosomal protein S11 19 135 IPR019981 GO:0003735|GO:0005840|GO:0006412
Pumo3g03732 138 FunFam 30S ribosomal protein S11, chloroplastic 11 138 - -
Pumo3g03732 138 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 6 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pumo3g03732 138 Gene3D Ribosomal protein S11 8 138 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03732 Pumo-Chr3 78943291 78943707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03732 1 128 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 35.036 1.64e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03732 K02948 - gmx:3989330 271.937