Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03713 ATGGCAGGTGGGATGAAGATTGTGAGGAAGACAAGCATGACCCTAAAGAGTACTTGGATTAAGTTTGGTGCCACTGGTCTTTGTTCCTCACTTGATATGGACAAGTATCATCTCATGCGTCGGGTTCACATAGATGCTCGTGATTTCAGAATTCTTGATCCTCTTCTCTCTTACCCCTCTACCATTCTAGGTCGAGAAAAGGCTATTGTTCTTAACTTGGAGCATATCAAGGCAATCATCACTGCTGACGAGGTGTTTTTGCAAGACTTAGCGGATGAAAATTTGGTCCCTGTTGTTGAGGAACTGCACAGGAGGTTAAATATTGTTCATACAAATCAAGGGTTTGGTCAGGACAATACTAGTCATCATCATCACGATTCAGTAGAAGAGAAGGGAGTTGAACACTCACACTCTTCCTATCAAAAATCATCAATTTTGATATGTTTCACAACTAAATTAGGAGAGAATAGTTACCCTTTGAATTCCAGGCCCTCGAAGTGGTTTTGGAAGCAATTTGTAGTTTCCTTGCTGCACGTACAACTAGATGAACTTGCCACCCAGATTAGTAGCCGTAATTTGGACAGAGTTCGTAAATTGAAGAACACAATGACGGGGCTGATTGCCAGGGTTCAAAAGGTAAAAGATGAGCTTGAACAATTAATGGACGATGATGATGACATGGCAGACGACCTATACTTATCAAGAAAATCGTCAGGCACATTATCATCATCAACAAGTCAATGTGGTTGGTCTGCCACGGCCCCCATGACCATAGAATCCAGAGCAAATAATGGAGATGAAAATGATGTGGAGGAGCTTGAAATGTTACTTGAGGCTTATTTCATGCAAATTGATGGCACATTGAACAGATTAACCACGCTACGAGGATATATCGATGATACTGAAGATTATATTAATATTCATCCTTTGAATATTTGTCTCCATCTTCTACACTTTATGCAGTTAGAGCTATTTCTTTCCTCGGCAGACCTTTCTCTAGCATTTTATGCTTTAGTGTGTGGAATATTTGGCATGAGTATTTCATATTCTTGGAATCAAAACCATGGTTACTTGTTCAAATGGGTAGTTATTTTTACAGGAGTTTTTTCTGCTATTATATTTCTCATTGTAGTTGCCTATGCTCGCAAAAAAGGATTGATTGGAGCTTGA 1170 0.3957 MAGGMKIVRKTSMTLKSTWIKFGATGLCSSLDMDKYHLMRRVHIDARDFRILDPLLSYPSTILGREKAIVLNLEHIKAIITADEVFLQDLADENLVPVVEELHRRLNIVHTNQGFGQDNTSHHHHDSVEEKGVEHSHSSYQKSSILICFTTKLGENSYPLNSRPSKWFWKQFVVSLLHVQLDELATQISSRNLDRVRKLKNTMTGLIARVQKVKDELEQLMDDDDDMADDLYLSRKSSGTLSSSTSQCGWSATAPMTIESRANNGDENDVEELEMLLEAYFMQIDGTLNRLTTLRGYIDDTEDYINIHPLNICLHLLHFMQLELFLSSADLSLAFYALVCGIFGMSISYSWNQNHGYLFKWVVIFTGVFSAIIFLIVVAYARKKGLIGA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03713 389 CDD Mrs2_Mfm1p-like 19 386 IPR039204 -
Pumo3g03713 389 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 387 IPR039204 -
Pumo3g03713 389 FunFam Magnesium transporter MRS2-1 6 90 - -
Pumo3g03713 389 Gene3D - 6 90 - -
Pumo3g03713 389 Gene3D Magnesium transport protein CorA, transmembrane region 172 309 - -
Pumo3g03713 389 MobiDBLite consensus disorder prediction 119 137 - -
Pumo3g03713 389 MobiDBLite consensus disorder prediction 113 137 - -
Pumo3g03713 389 Coils Coil 196 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03713 Pumo-Chr3 78589891 78594319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03713 7 362 MRS2 Gene Family AT5G64560 50.133 1.87e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03713 K16075 - pda:103716586 343.969