Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03709 ATGAAAATGCATCACTTCTCTGCTCTCTTCTTCTTCCTCAGCCTCAGCCTTTGCAACGCTCAAACAGCACGACAGCAGAACAACACGGGCTTCACGTGCAACTTCACCCGCACGTGCGAGGCATACGCCTTCTACCGCGCCACCGCTCCCAACTTCACCGACCTGGCCTCCATCGGCGACCTCTTCGAGGTGAGCCGGGTGATGATCGCAACCCCGTCCAACATCTCGTCTCCCTCCACACCCTTAGTCCAAGACCAACCCCTCTTCGTCCCCTTAACCTGCTCCTGCAACCCTGTCAACGCCACCTTCGGCTCCATCTCCTACGCCAACATCTCCTACGCCATCCAATCCGGCGACACCTTCTACATCGTCTCCACCTTCAAGTTCAACAACCTCACCACCTACCCCTCCGTCGAAGCCGTCAACCCCACCCTCGTCGCCACCGACCTCTCCGCCGGCCAGGAGACCATCTTCCCCGTCTTCTGCAAATGCCCCGACAACAACAGAACCAACTACATGATCTCCTACGTTGTCCAGCCCGCGGACAACATATCCTCTATTGCTTCCACGTTTGGTGCTGAGGAACAATCCATCATTGACGTTAACGGCGGCACTCTCTTTGATTATGACACCATTTTCGTTCCCGTGTCGCGGCTGCCGGTTCTGTCCCAGCCTGCGGTGGTTCCTTCCGCGCCGCCGCCCGGGAACGGGACGGTGGTTGAAAGGAATGATAGGACGGGGACTGTCAGAGGGTTGGGGATTGGGTTGGGGGTTGTGGGGTTGTTGCTGATTTTGGTGAGTGGTGTGTTGGTGTATAGAGAGGTTGTGATGAAGAAGAGGTTGAGGAATGGTATTGATGAGGAGGAAGGGAGACAGAGGAATAAGGTCTATTTTGGAGGGAAAAAAGAGGAGAAGAATATGGATGTCAAGTTGATGGCTAATGTGTCCGATTGTTTGGATAAGTATAGGGTTTTTCGAATTGAGGAACTGGTGGAAGCCACCGATGGGTTTGATCAGAATTGCTTGATTCAGGGGTCGGTTTACAGAGGTGAAATTGATGGAGAGGTCTTTGCCATCAAGAAGATGAAGTGGAATGCCTATGAGGAACTCAAGATCTTGCAGAAGGTAAACCATGGGAATCTGGTGAAGTTGGAGGGATTTTGTATAGACCCAGAAGAAGCAAATTGCTATCTAGTCTATGAATATGTAGAGAATGGATCTCTATACACATGGCTGCATGAGGACAAAAACGAAAAGCTGAGCTGGAAAACAAGGCTACGAATAGCCATTGACATTGCCAATGGCCTCCAATACATCCACGAGCACACAAGGCCACGGGTTGTGCACAAAGACATCAAGAGCAGTAACATTCTCTTGGACTCCAGCATGAGAGCAAAAATTGCCAATTTTGGGCTTGCAAAGTCAGGAATGAATGCCATTACCATGCACATTGTGGGAACACAGGGCTATATTGCCCCTGAATATCTGGCTGATGGTGTGGTCTCTACAAAGATGGATGTGTTCTCTTTTGGGGTTGTGTTGCTTGAACTAATTTCTGGGAAGGAAGCCATTGATGAGGAGGGAAATCTCTTGTGGGCAAGTGCCATCAAAACTTTTGAAGTGGACAATGACCAAGAGAAGGCTAGGAGACTGAAGGAATGGTTAGATAAGGATATTTTAAGGGAGACATGCTCAATGGAAAGTTTGATGGGTGTTCTCACTATTGCAATTGCTTGCTTGCATAGAGACCAGTCAAAGAGGCCCAGCATAATGGATATTGTCTATGCTCTAAGTAAAAGTGAAGATGTGGGCTTTGACATCTCAGATGAAGGGATTGGTTCTCCACGGGTGTTGGCTAGGTGA 1863 0.4965 MKMHHFSALFFFLSLSLCNAQTARQQNNTGFTCNFTRTCEAYAFYRATAPNFTDLASIGDLFEVSRVMIATPSNISSPSTPLVQDQPLFVPLTCSCNPVNATFGSISYANISYAIQSGDTFYIVSTFKFNNLTTYPSVEAVNPTLVATDLSAGQETIFPVFCKCPDNNRTNYMISYVVQPADNISSIASTFGAEEQSIIDVNGGTLFDYDTIFVPVSRLPVLSQPAVVPSAPPPGNGTVVERNDRTGTVRGLGIGLGVVGLLLILVSGVLVYREVVMKKRLRNGIDEEEGRQRNKVYFGGKKEEKNMDVKLMANVSDCLDKYRVFRIEELVEATDGFDQNCLIQGSVYRGEIDGEVFAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDPEEANCYLVYEYVENGSLYTWLHEDKNEKLSWKTRLRIAIDIANGLQYIHEHTRPRVVHKDIKSSNILLDSSMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGNLLWASAIKTFEVDNDQEKARRLKEWLDKDILRETCSMESLMGVLTIAIACLHRDQSKRPSIMDIVYALSKSEDVGFDISDEGIGSPRVLAR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03709 620 ProSiteProfiles Protein kinase domain profile. 261 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03709 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Pumo3g03709 620 Pfam Protein kinase domain 358 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03709 620 Gene3D Phosphorylase Kinase; domain 1 306 402 - -
Pumo3g03709 620 CDD LysM 174 214 IPR018392 -
Pumo3g03709 620 SUPERFAMILY Protein kinase-like (PK-like) 321 597 IPR011009 -
Pumo3g03709 620 SMART serkin_6 337 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03709 620 Gene3D Transferase(Phosphotransferase) domain 1 403 608 - -
Pumo3g03709 620 FunFam PTI1-like tyrosine-protein kinase 3 403 603 - -
Pumo3g03709 620 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03709 Pumo-Chr3 78471909 78476380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03709 9 599 Receptor kinase-like Gene Family AT2G23770 32.962 6.15e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo3g03709 Pkinase 3.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03709 - - gmx:100802872 966.066