Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03701 ATGGAAGCATCGCCGCCGCCGCCACGCACCATCCTGGGCAAGTACCAGCTCACGCGCTTCCTCGGCCGCGGCAACTTCGCCAAGGTCTACCAGGCGCGCTCCCTCCTCGACGGCTCCACGGTCGCCGTGAAGGCCATCGACAAGTCCAAGACGGTGGACGCCGCCATGGAGCCCCGCATCGTGCGCGAGATCGACGCCATGCGCCGCCTCCACCACCACCCAAACATCCTCAAAATCCACGAGGTCCTGGCTACCAAAACCAAGATCTACCTCATCGTCGACTTCGCCGGCGGCGGCGAGCTCTTCTCCAAGCTCTCCCGCCGCGGCCGCCTCCCGGAGCCCCTCGCCCGCCGCTACTTCGTGCAGCTCGTCTCCGCGCTCCGCTTCTGCCACCGTCACGGCGTCGCCCACCGCGACCTCAAGCCGCAGAACCTCCTCCTGGACGCCACCGGCGACCTCAAGGTGTCCGACTTCGGCCTCTCGGCGCTCCCGGAGCACCTCCACAACGGCCTCCTCCACACCGCCTGCGGCACGCCGGCCTTCACCGCGCCGGAGATCCTCCGCCGCGTCGGCTACGACGGCTCCAAGGCCGACGCCTGGTCCTGCGGCGTCATCCTCTACAACCTCCTCGCCGGCCACCTCCCCTTCGACGACGCCAACATTCCGGCCATGTGCCGCCGGATCTCCCGCCGCGACTACCAGTTCCCGGCGTGGATCTCAAAATCCGCGCGGAGCCTCATTTACCAATTGCTCGACCCGAACCCTAAGACGCGAATTTCGTTAGAAAATGTTTGCGATAACAAATGGTTTAAGAATAAAAATTCGTTGAAAGCAAACGCGGTGGTGGTGGAAGAGAGTGTTTTGGAGTCTGATTTGTATAACAAGTGTGGCGACGGTTATAAATTGGGGATGAATGCGTTTGACATAATATCGATGTCGTCGGGGTTGGATTTGCGAGGGTTGTTCGAAACGACGTCGGAGAAGGGGAGAAGGAGGGAGAAAAGGTTCACTTCGGAGAAGAAGGTGGAGGTGGTGGAGGCGAAGGTGAAGGAGGTTGGAGAGAAATTAGGGTTTAGGGTTGAGATTGGGAAGAACGGTGCGATTGGGTTGGGGAAAGGGAAGGTGGCAGTTGTGGTTGAGGTGTTTGAGATTGTGGCTGAGTTGTTGCTTGTGGCAGTGAAAGTGGTGGATGGTGGGGTGGAGTTTGAGGAGCTTCATTGGGATGATTGGAGAATTGGGCTTCAAGATGTTGTTCTCTCATGGCATAACAATGATGATGACCACTTCGCAACCTTGTCACAGTAG 1305 0.5923 MEASPPPPRTILGKYQLTRFLGRGNFAKVYQARSLLDGSTVAVKAIDKSKTVDAAMEPRIVREIDAMRRLHHHPNILKIHEVLATKTKIYLIVDFAGGGELFSKLSRRGRLPEPLARRYFVQLVSALRFCHRHGVAHRDLKPQNLLLDATGDLKVSDFGLSALPEHLHNGLLHTACGTPAFTAPEILRRVGYDGSKADAWSCGVILYNLLAGHLPFDDANIPAMCRRISRRDYQFPAWISKSARSLIYQLLDPNPKTRISLENVCDNKWFKNKNSLKANAVVVEESVLESDLYNKCGDGYKLGMNAFDIISMSSGLDLRGLFETTSEKGRRREKRFTSEKKVEVVEAKVKEVGEKLGFRVEIGKNGAIGLGKGKVAVVVEVFEIVAELLLVAVKVVDGGVEFEELHWDDWRIGLQDVVLSWHNNDDDHFATLSQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03701 434 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03701 434 Gene3D Kinase associated domain 1, KA1 306 419 - -
Pumo3g03701 434 FunFam Non-specific serine/threonine protein kinase 7 296 - -
Pumo3g03701 434 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03701 434 FunFam Non-specific serine/threonine protein kinase 8 100 - -
Pumo3g03701 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Pumo3g03701 434 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 391 - -
Pumo3g03701 434 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pumo3g03701 434 FunFam Non-specific serine/threonine protein kinase 302 419 - -
Pumo3g03701 434 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Pumo3g03701 434 CDD CIPK_C 305 415 - -
Pumo3g03701 434 SUPERFAMILY Protein kinase-like (PK-like) 11 278 IPR011009 -
Pumo3g03701 434 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03701 434 Pfam NAF domain 304 361 IPR004041 GO:0007165
Pumo3g03701 434 Gene3D Transferase(Phosphotransferase) domain 1 8 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03701 Pumo-Chr3 78377651 78379355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03701 2 424 Miscellaneous Gene Families AT3G23000 57.773 1.47e-167 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo3g03701 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03701 K12761 - gmx:100305372 709.523