Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03689 ATGAGAAATAGAAAAACCTATTCGGCTAAGCCAGATGTTGATGATTATAGTGCAAAGCGCAACACGGTGACACCAGCAGTTGATGTCAATGAGCAATCTCCATGCAATCTGCAAAAGAAACCCAAGTGGGACTGGAGTTGCACTTTATGCCAAGTCTCTGCCACAAGTGAGAAAGGATTGAATGACCATCTTCAGGGAAAAAAACACAAGGCTAGATTAAGAAGCATCCCTGAGAAATCAGAAAAGGGAACGTCTAACAATGGGAAGTGA 270 0.4259 MRNRKTYSAKPDVDDYSAKRNTVTPAVDVNEQSPCNLQKKPKWDWSCTLCQVSATSEKGLNDHLQGKKHKARLRSIPEKSEKGTSNNGK 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03689 89 SMART ZnF_U1_5 42 76 IPR003604 GO:0003676|GO:0008270
Pumo3g03689 89 SUPERFAMILY beta-beta-alpha zinc fingers 33 77 IPR036236 -
Pumo3g03689 89 MobiDBLite consensus disorder prediction 1 17 - -
Pumo3g03689 89 MobiDBLite consensus disorder prediction 58 89 - -
Pumo3g03689 89 PANTHER OS06G0651300 PROTEIN-RELATED 9 83 - -
Pumo3g03689 89 MobiDBLite consensus disorder prediction 1 25 - -
Pumo3g03689 89 Pfam Zinc-finger of C2H2 type 45 69 - -
Pumo3g03689 89 Gene3D Classic Zinc Finger 24 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03689 Pumo-Chr3 77929889 77930511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03689 15 82 C2H2 Transcription Factor Family AT2G19380 35.897 1.68e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03689 - - lang:109355062 97.8265