Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03685 ATGGCAACACAAGCTGAAATTGAGCATCCTAGGAAGGCATTCGGATGGGCAGCTAGGGATCCTTCTGGTCTTCTCTCCCCATTCAATTTTTCCAAAAGGGAAACAGGTGAAAAAGATGTGGCATTCAAAGTGTTGTACTGTGGGATATGTCACTCGGACCTCCACTTTGCGAAGAATGAATGGGGCACTTCCATCTATCCACTAGTCCCAGGGCATGAGATAGTTGGTGTAGTGACAGAGGTGGGAAGCAAAGTAGAGAGGTTCAAAGTTGGGGACAAAGTGGGTGTGGGATGCATGGTTGATTCCTGCTGCACCTACCAATACTGTGTTGACAATCTTGAGAGTTATTGTCCGCAATATACGCTCACATATAATGCCAAATATAAAGATGGCACCACCACATATGGAGGCTACTCTGACTCAATGATTGTAGATGAACACTTTGTGATTCGCATTCCTGGTGGCTTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGCCATCACTGTGTATAGTCCTCTCAGACATTTTGCTCTAGACAAGCCTGGTCTACATGTGGGTGTGGTTGGTCTTGGTGGACTAGGCCATGTGGCTAGTGAAGGTGCAATGGCCACTTTGGATGGTATTATTGACACAGTTTCTGCCGTTCATCCACTCTTACCTCTCATTGGTTTGCTCAAGACTGATGGAAAGCTTGTAATGGTCGGTGCACCAAATAAGCCTTTGGAGCTTTCTGTCATTCCTTTAATTTTAGGGAGAAGGATAGTAGCTGGCAGTAGCACTGGAGGGATGAAGGAGACCCAAGAAATGATTGACTTTGCTACCGAACACAATGTAAAACCTGACATTGAGGTCATTCCTATTGATTATGTCAACACAGCAATGGAGCGTCTCCTCAGAGCAGATGTAAAATATAGATTTGTGATTGATATCGGAAACACACTAAAACCGAGCTCTTGA 963 0.4517 MATQAEIEHPRKAFGWAARDPSGLLSPFNFSKRETGEKDVAFKVLYCGICHSDLHFAKNEWGTSIYPLVPGHEIVGVVTEVGSKVERFKVGDKVGVGCMVDSCCTYQYCVDNLESYCPQYTLTYNAKYKDGTTTYGGYSDSMIVDEHFVIRIPGGLPLDAAAPLLCAAITVYSPLRHFALDKPGLHVGVVGLGGLGHVASEGAMATLDGIIDTVSAVHPLLPLIGLLKTDGKLVMVGAPNKPLELSVIPLILGRRIVAGSSTGGMKETQEMIDFATEHNVKPDIEVIPIDYVNTAMERLLRADVKYRFVIDIGNTLKPSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03685 320 PANTHER ALDEHYDE REDUCTASE 6 200 IPR047109 GO:0016616
Pumo3g03685 320 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pumo3g03685 320 FunFam Putative cinnamyl alcohol dehydrogenase 6 283 312 - -
Pumo3g03685 320 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Pumo3g03685 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 281 IPR036291 -
Pumo3g03685 320 SMART PKS_ER_names_mod 23 310 IPR020843 GO:0016491
Pumo3g03685 320 Gene3D - 203 282 - -
Pumo3g03685 320 Gene3D - 167 202 - -
Pumo3g03685 320 FunFam Uncharacterized protein 16 166 - -
Pumo3g03685 320 FunFam Putative cinnamyl alcohol dehydrogenase 6 201 282 - -
Pumo3g03685 320 CDD CAD1 14 311 IPR047109 GO:0016616
Pumo3g03685 320 Gene3D - 283 311 - -
Pumo3g03685 320 Gene3D - 17 166 - -
Pumo3g03685 320 SUPERFAMILY GroES-like 19 184 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03685 Pumo-Chr3 77886049 77887766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03685 11 319 Monolignol Biosynthesis Gene Families AT4G37990 59.143 1.46e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03685 K23232 - gmx:100816901 504.212