Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03684 ATGGCAACAGAAGCTGAAACAGAGCATCCTAGGAAGGCATTCGGATGGGCAGCTAGGGATACTTCTGGTATTCTCTCCCCTTTCAATTTCTCCACAAGGAAAACTGGTGAAAAAGATGTGACATTCAAAGTTTTGTACTGTGGGATATGTCACTCGGACGAAGAACGAATAGGGCATTTCGACCTATCCACTAGTCCCAGCTGTATGAAATGGTGCAGGCACGAGATAGTTGGTGTAGTGACAGAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGGGACAAGGTGGGTGTGGGAGGCCTGGTTGATTCCTGCCGCACCTGCCAAAACTGTTCTGAAAATCTTGAGATTTATTGTCCAAAATATACGGGCACATACTGTGGAAACTACAAAGATGGCACCACTACATACGGAGGCTTCTCTGACTCAATGGTTGCAGACGAACACTTTGTGGTTCGCTTTCCTGATGGCTTTCCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGCATCACAGTGTATAGCACTCTCAGATATTTTGCACTAGACAAGCCTGGTCTACATGTGGGTGTGGTTGGTCTTGGTGGACTAGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTAGGGCTAAGGTCACAGTAATAAGTACATCACCCAACAAAATGGAGGAAGCAATACAACACCTGGGAGTTGACTCATTTCTAATAAGCGGTGACCAAGATCAGATGAAGTCTCATGGAAAGCTTGTAATGCTCGGTGCACCAGATAAGCCTATGGAGCTTTCAGTAATGCCTTTAATTATAGGGAGAAAGCTAATAGGTGGCAGTTGCACTGGAGGGATGAAGGAGACCCAAGAGATGATGGACTTTGCTGCCGAGCACAACTTAAAACCCGACATTGAGGTCATTCCTATTGATTATGTCAACACAGCAACGGAGCGTCTCCTCAAAGTAGATGTAAAATATAGATTTGTGATTGACATTGGAAACACACTAAAACCAAGCTCTTGA 1011 0.452 MATEAETEHPRKAFGWAARDTSGILSPFNFSTRKTGEKDVTFKVLYCGICHSDEERIGHFDLSTSPSCMKWCRHEIVGVVTEVGSKVEKFKVGDKVGVGGLVDSCRTCQNCSENLEIYCPKYTGTYCGNYKDGTTTYGGFSDSMVADEHFVVRFPDGFPLDAAAPLLCAGITVYSTLRYFALDKPGLHVGVVGLGGLGHMAVKFAKAFRAKVTVISTSPNKMEEAIQHLGVDSFLISGDQDQMKSHGKLVMLGAPDKPMELSVMPLIIGRKLIGGSCTGGMKETQEMMDFAAEHNLKPDIEVIPIDYVNTATERLLKVDVKYRFVIDIGNTLKPSS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03684 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 297 IPR036291 -
Pumo3g03684 336 SUPERFAMILY GroES-like 9 201 IPR011032 -
Pumo3g03684 336 PANTHER ALDEHYDE REDUCTASE 6 245 IPR047109 GO:0016616
Pumo3g03684 336 SMART PKS_ER_names_mod 23 316 IPR020843 GO:0016491
Pumo3g03684 336 FunFam Uncharacterized protein 16 168 - -
Pumo3g03684 336 FunFam Putative cinnamyl alcohol dehydrogenase 6 299 328 - -
Pumo3g03684 336 FunFam Cinnamyl alcohol dehydrogenase 169 248 - -
Pumo3g03684 336 Pfam Alcohol dehydrogenase GroES-like domain 38 153 IPR013154 -
Pumo3g03684 336 Gene3D - 245 298 - -
Pumo3g03684 336 Gene3D - 169 244 - -
Pumo3g03684 336 CDD CAD1 14 327 IPR047109 GO:0016616
Pumo3g03684 336 Gene3D - 16 168 - -
Pumo3g03684 336 Gene3D - 299 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03684 Pumo-Chr3 77861967 77863704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03684 11 335 Monolignol Biosynthesis Gene Families AT4G37990 58.924 8.59e-132 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03684 K23232 - gmx:100816901 466.463