Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03683 ATGGATTCAAAGCGCAACAGTTTTGGGTTCCCAAAAGGCTTAGCTTGTGGGATGAAACAAATGGCAAGAGAAAACGAAAAAGTTGTTACCTATGGGTGGGCAGCTAGAGACACTTCGGGAATTCTCTCCCCATTCCACTTTACCAGAAGGGCAAATGGTGATAATGATATCACACTTGACATACTCTATTCTGGGATTTGCCACACGGACCTCCACATGGTGAAGAACGACTTTGGATTGTCCATCTATCCAATGGTCCCTGGCCATGAAATTGTGGGTAAAGTGACAAAGGTGGGTAGCAAAGTCACAAAATTCAGTGTTGGTGACATAGCTGGTGTGGGTGGCAGTGTGGGTTCGTGTGGCTCATGTTCCGACTGCAGCGAGGGCTTCTATGTATATTGTCCAAAAATGATTTTAACCTACAGTGGACACTACCATGATGGAACAATAACCCAAGGTGGATACTCAAATAACATAGTGGTTGATCAGAACTTTGCGGTGCTAGTCCCAAAATCTCTTCCACTAGATGGTGCTACCCCGCTGCTATGTGCTGGAATCACAGTATACAGCCCAATGAAATATTATGGGCTTGCTCAGCCCGGATTGCACTTGGGTGTGGTGGGCCTGGGAGGCCTAGGTCATGTGGCTGTCAAGTTTGCTAAGGCTTTTGGTATGCATGTCACTGTGATTAGCACATCTCCCAGCAAGAAAGAGGAAGCATTGCAAAAGCTTGGTGCTGATGCATTCTTGGTTAGTCTAGACCAACAACAATTGCAGGATGCCAAGGGCACAATGGATGCCATTATTGACACAGTTTCAGCTAATCACTCTATCCAAGAACTAATTAGTTTATTGAAAACGAGTGGAAAGTTGATTTTGGTGGGTGGACCACCCAAGCCTCTTGAGGTATTAGCTATGCCTTTGCTTTTGGGGAGAAAGATGATCGCTGGTAGTGCTGGAGGTGGGAGAGAAGAGATTCAAGAGATGATAAATTTTGCAGCAAAACACAATATTACGGCAGATGTGGAAGTCATTCCAATGAATTACGTGAACAATGCCTTTGAGAGACTGGAAAAAAATGATGTTAAATATCGCTTTGTCATTGATGTGGCAAATACGATATAA 1125 0.4427 MDSKRNSFGFPKGLACGMKQMARENEKVVTYGWAARDTSGILSPFHFTRRANGDNDITLDILYSGICHTDLHMVKNDFGLSIYPMVPGHEIVGKVTKVGSKVTKFSVGDIAGVGGSVGSCGSCSDCSEGFYVYCPKMILTYSGHYHDGTITQGGYSNNIVVDQNFAVLVPKSLPLDGATPLLCAGITVYSPMKYYGLAQPGLHLGVVGLGGLGHVAVKFAKAFGMHVTVISTSPSKKEEALQKLGADAFLVSLDQQQLQDAKGTMDAIIDTVSANHSIQELISLLKTSGKLILVGGPPKPLEVLAMPLLLGRKMIAGSAGGGREEIQEMINFAAKHNITADVEVIPMNYVNNAFERLEKNDVKYRFVIDVANTI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03683 374 SMART PKS_ER_names_mod 40 368 IPR020843 GO:0016491
Pumo3g03683 374 FunFam Putative cinnamyl alcohol dehydrogenase 6 341 370 - -
Pumo3g03683 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 88 102 IPR002328 GO:0008270|GO:0016491
Pumo3g03683 374 Gene3D - 33 370 - -
Pumo3g03683 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 338 IPR036291 -
Pumo3g03683 374 Pfam Alcohol dehydrogenase GroES-like domain 55 167 IPR013154 -
Pumo3g03683 374 SUPERFAMILY GroES-like 38 201 IPR011032 -
Pumo3g03683 374 CDD CAD1 32 369 IPR047109 GO:0016616
Pumo3g03683 374 Gene3D - 184 340 - -
Pumo3g03683 374 PANTHER ALDEHYDE REDUCTASE 27 373 IPR047109 GO:0016616
Pumo3g03683 374 FunFam Cinnamyl alcohol dehydrogenase 184 340 - -
Pumo3g03683 374 Pfam Zinc-binding dehydrogenase 211 334 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03683 Pumo-Chr3 77817051 77819992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03683 31 374 Monolignol Biosynthesis Gene Families AT4G37990 63.953 4.13e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03683 K23232 - gmx:100801089 618.616