Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03682 ATGGTTTCTGGGCATGAGGTAGCTGGTGTAGTGACAGAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGGGACAAGGTGGGTGTGGGATGCTTGGTTGATTCCTGCAGTACCTGCCAAAACTGTTCTGACAATCTTGAGAATTATTGTCCACAATTTACGCTCACATATGGTGCCAAATATAGAGATGGCACCACCACATATGGAGGCTACTCTGACTCAATGGTTGCAGATGAACATTTTGTGATTCGCATTCCTGATAGCTTACCACTTGATGCTGCTGCACCTCTCATTTGTGCTGGCATCACAGTGTATAGCCCTCTCAGATATTATGGACTTGACAAGCCAGATCTACATGTGGGTGTGGTTGGTCTCGGTGGACTAGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTAACAGTAATAAGTACATCACCCAACAAAAAGGAGGAAGCAATACAACATCTTGGAGCTGATTCCTTTCTAATAAGCCGCTGCAATGGTACTTTGGATGGTATTATTGACACAGTTTCTGCTGTTCATCCTCTCTTACCCCTCATTGGTTTGCTCAAGTCTCATGGAAAGCTTGTAATGGTGGGTGCACCAGAGAAGCCTCTGGAACTGCCTGTCTTTCCTTTACTTGCGGGGAGAAAGATAGTAGCTGGCAGTCTCATTGGAGGGTTAAAGGAGACGCAAGAAATGATTGATTTTGCAGCGAAACACAATGTGAAACCTGACATTGAAGTCATTCCTATGGACTATGTCAACACAGCAATGGAATGTCTCCTTAAAGCAGATGTTAAATATCGATTTGTTATTGACATTGGAAACACACTGAAAGTCTGA 858 0.4406 MVSGHEVAGVVTEVGSKVEKFKVGDKVGVGCLVDSCSTCQNCSDNLENYCPQFTLTYGAKYRDGTTTYGGYSDSMVADEHFVIRIPDSLPLDAAAPLICAGITVYSPLRYYGLDKPDLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKEEAIQHLGADSFLISRCNGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLAGRKIVAGSLIGGLKETQEMIDFAAKHNVKPDIEVIPMDYVNTAMECLLKADVKYRFVIDIGNTLKV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03682 285 Gene3D - 100 249 - -
Pumo3g03682 285 FunFam Cinnamyl alcohol dehydrogenase 100 249 - -
Pumo3g03682 285 PANTHER ALDEHYDE REDUCTASE 1 282 IPR047109 GO:0016616
Pumo3g03682 285 Pfam Alcohol dehydrogenase GroES-like domain 2 84 IPR013154 -
Pumo3g03682 285 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 89 248 IPR036291 -
Pumo3g03682 285 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 4 18 IPR002328 GO:0008270|GO:0016491
Pumo3g03682 285 Gene3D - 1 279 - -
Pumo3g03682 285 FunFam Putative cinnamyl alcohol dehydrogenase 6 250 279 - -
Pumo3g03682 285 Pfam Zinc-binding dehydrogenase 127 243 IPR013149 -
Pumo3g03682 285 CDD CAD1 1 278 IPR047109 GO:0016616
Pumo3g03682 285 SUPERFAMILY GroES-like 1 116 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03682 Pumo-Chr3 77805502 77807538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03682 1 284 Monolignol Biosynthesis Gene Families AT4G37990 70.447 1.00e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03682 K23232 - gmx:100816901 516.153