Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03676 ATGGCTTGGTCGCACTCAGCACAAAAGGTGAACATGCCAGTGAGACAGATGAGAGAGAGCTCAGAACAACACCTTGTGATCAAACCCCATTTGCAGAACCCCATGAATGGAGCTAAGAAGGTTCCCAGAGCTGTTCAAAATGGCAAAGGTCCACCACCACTGCCACAAGAACCCCACAACCAAACTTCACCTCAGGCAAGGAACAAGGGGAGAAGAAGGAGTAGAGGTGGCAGAAAATGTGATCAAGGAGATGTTTTGATGAGACCTATTGTGACAAGTGCTGTTGAAAATGGAAGTACCATGTGTGGTGAAATAGAGATGGGTTACCCTACTTCAAGCAAGTCTTTGAGCTTTGCTCCTAGACCTGGTTATGGACAAGTTGGGACAAAGTGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAGTATGATGTCAGTATTACCCCTGAAGTGTCTTCCAAAGCAGTGAACAGGTCCATTATAGCAGAACTTGTGAGGCTGTATAAAGAGTCTGACCTTGGGATGAGGCTTCCAGCATATGATGGCAGAAAAAGTCTGTACACTGCAGGGGCACTTCCCTTTTCCTGGAGAGAGTTTAAGATAAAGGTTGTGGATGATGAGGATGGAGTTAATGACCCCAAAAGGGAAAGAGAATATAGAGTGGTGATCAAGTTTGTTGCTAGGGCAAATTTGCATCACTTGGGTCAGTTTCTAGCTGGTAAACGTGCTGATGCTCCCCAAGAGGCACTCCAAATTCTTGACATTGTATTAAGAGAGCTATCGTCTAAGAGGTTTTGCCCAATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGTTTGGAATCGTGGTGTGGATTTTACCAAAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCTTCTGCCGCGTTCATTGAACCTCTTCCAGTTGTGGAATATGTTGGCCAGCTATTAGGAAAAGATATCCTGTCGAGGCAATTGTCTGATGCTGATCGCATTAAAATTAAGAAAGCTCTTAGAGGAGTTAAAGTTGAAGTAACCCACAGAGGGAGTGTTAGAAGAAAGTATCGAGTTTCTGGTTTGACTTCTCAACCTACCAGAGAACTTGTGTTTCCCGTTGATGAGAATTCAACTATGAAGTCAGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACAATTAAATATACTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAAGCAAATTATTTACCTATGGAGGCCTGCAAAATTGTTGAAGGACAACGATATACAAAAAGGTTGAATGAGAAGCAAATCACTGCTCTCCTGAAAGTTACTTGTCAAAGACCTCGTGATCGAGAAAATGACATTTTGCGGACCATTCAGCACAATGCTTATGATCAAGATCCTTATGCACAGGAATTTGGAATTAAAATAAGTGAAAATCTAGCTTCTGTAGAAGCACGAATTCTCCCTGCCCCATGGCTTAAATATCATGAAAGTGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATAAATGGGATGACTGTCAGCCGGTGGGCATGCATAAACTTTTCACGAAGCGTACAAGACAGTGTTGCTCGCACTTTTTGTACCGAACTAGCTCAAATGTGCCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAACCTGAGCATGTGGAGAAAGCTTTGAAGCATGTTTACCATGTGTCAACAAACAAAACCAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCCGACAACAATGGTTCTCTCTATGGTGATCTGAAGCGTATTTGTGAAACCGACCTTGGTTTAATTTCTCAATGTTGTTTGACAAAGCATGTCTTTAAGATCACTAAGCAGTATTTGGCTAATGTGTCTTTGAAAATCAATGTCAAGATGGGAGGTAGAAACACTGTTCTGGTTGATGCTGTAAGCTGTAGAATACCATTGGTTAGTGACATACCAACTATAATATTTGGAGCAGATGTTACCCATCCTGAAGATGGAGAAGACTCCAGCCCTTCAATAGCAGCTGTAGTAGCATCTCAAGACTGGCCTGAAGTGACAAAATATGCTGGATTGGTGTGTGCTCAAGCTCATAGACAGGAACTAATACAAGATTTGTACAAAATGTGGCATGACCCTGTTCGTGGCTTAGTCAGTGGTGGCATGATCCGAGATTTGTTGATTTCCTTTAGAAAGGCAACAGGACAGAAGCCTCTAAGGATTATATTTTATAGGGATGGTGTAAGTGAAGGGCAGTTTTACCAAGTTCTACTTTATGAGTTGGATGCAATTCGGAAGGCATGTGCTTCTTTAGAACCAAACTATCAACCTCCAGTAACTTTCATAGTTGTACAAAAAAGACACCATACTCGATTGTTTGCAAATAACCACAGGGACAGGAACAGTACAGATAAGAGTGGAAATATATTGCCTGGGACTGTTGTTGATTCCAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACGAGTCGTCCAGCTCATTATCATGTTCTGTGGGATGAAAACAACTTCACCGCAGATGGAATTCAGTCTTTGACAAACAATCTCTGTTATACATATGCCAGGTGTACACGCTCTGTATCTGTTGTTCCTCCAGCATATTATGCACATCTGGCGGCTTTTCGAGCGCGTTTCTATATGGAACCAGACCTGCAGGAGAATGGCTCCTCAGGTGGTGGTTCCAAGGCAACAAAAGCAGGTGGAGAGTGTGGTGGGGTAAAGCCATTGCCAGCTCTGAAAGAAAATGTGAAGAGAGTAATGTTTTATTGTTAG 2934 0.4237 MAWSHSAQKVNMPVRQMRESSEQHLVIKPHLQNPMNGAKKVPRAVQNGKGPPPLPQEPHNQTSPQARNKGRRRSRGGRKCDQGDVLMRPIVTSAVENGSTMCGEIEMGYPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVSITPEVSSKAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGALPFSWREFKIKVVDDEDGVNDPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEYVGQLLGKDILSRQLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAQEFGIKISENLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCTELAQMCQVSGMEFNPEPVIPIYNAKPEHVEKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPEDGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKMWHDPVRGLVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSSGGGSKATKAGGECGGVKPLPALKENVKRVMFYC 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03676 977 ProSiteProfiles PAZ domain profile. 326 440 IPR003100 GO:0005515
Pumo3g03676 977 SMART PAZ_2_a_3 330 462 IPR003100 GO:0005515
Pumo3g03676 977 SUPERFAMILY Ribonuclease H-like 606 936 IPR012337 -
Pumo3g03676 977 FunFam protein argonaute 10-like 683 977 - -
Pumo3g03676 977 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 110 936 - -
Pumo3g03676 977 ProSiteProfiles Piwi domain profile. 614 935 IPR003165 GO:0003676
Pumo3g03676 977 Gene3D - 683 977 IPR036397 GO:0003676
Pumo3g03676 977 Gene3D paz domain 319 444 - -
Pumo3g03676 977 CDD Piwi_ago-like 484 934 IPR045246 -
Pumo3g03676 977 Gene3D - 504 677 - -
Pumo3g03676 977 SMART Piwi_a_2 614 935 IPR003165 GO:0003676
Pumo3g03676 977 Pfam Argonaute linker 2 domain 466 512 IPR032472 -
Pumo3g03676 977 Pfam Mid domain of argonaute 523 600 IPR032473 -
Pumo3g03676 977 Pfam Argonaute linker 1 domain 274 323 IPR014811 -
Pumo3g03676 977 Pfam Piwi domain 615 934 IPR003165 GO:0003676
Pumo3g03676 977 Pfam PAZ domain 352 456 IPR003100 GO:0005515
Pumo3g03676 977 SUPERFAMILY PAZ domain 320 480 IPR036085 GO:0005515
Pumo3g03676 977 Pfam N-terminal domain of argonaute 130 264 IPR032474 -
Pumo3g03676 977 MobiDBLite consensus disorder prediction 1 18 - -
Pumo3g03676 977 MobiDBLite consensus disorder prediction 1 82 - -
Pumo3g03676 977 FunFam Protein argonaute-2 319 445 - -
Pumo3g03676 977 CDD PAZ_argonaute_like 325 439 - -
Pumo3g03676 977 SMART DUF1785_2 273 325 IPR014811 -
Pumo3g03676 977 FunFam Argonaute 10 504 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03676 Pumo-Chr3 77724973 77734274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03676 12 977 Eukaryotic Initiation Factors Gene Family AT5G43810 81.344 0.0 1652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03676 3 77724973 77734274 Pumo3g03676 3 77724973 77734274 ECH