Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03662 ATGGGGAGGACAGGGAAATGGCTTAGGAACTTGTTGACAGGGAAGAGAGACAGAGAGAAAGAGAAGGAAAAATGTGGTACCAACATGTGCTTGTTGAATGGCACAACAGAAAATCCAACCACACCTGTTTCAACAACAACAACAACAACAACCCCCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCTTCCAGGGAACTGAATCTTGCAGAATCTGGTGTCACTGCTTCAGTGACAACAGTGCAAAATGCCACCACAGATGCTGAGAATGATCAAAGGAAACATGCCATGGTGGCTGTGGCTGCTGCTGCACCTGTTCCTGTGATCTGCTTGACTCCTGATTCCAATGGATTGCCAACAAGATGTGTTGAAGAGGCTGCAGCCATTAAAATTCAATCAGTGTTTCGGTCCTACTTGGCAAGAAAGGCACTGTATGCTCTTAGAGGACTAGTGAAGTTGCAGGCACTGGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTAAGATGCATGCAGGCTTTGGTCATAGCACAAGCCAGGGCTCGTGCTCAGAGGGCACGGATGGTGTCAGAAGGAATGGCTGATCAAAAGCTATCACCCTACAGAATAACCGCAGAGGACAACTTCATGCATATGTATAATGAAATGGACAGTCGTTTGGAAGAGAATGCCAAGATTGTGGAGATGGCTGTTTGTGAATCCAAAGGTAACTCAAGAGGCAGAAACAATGGTGCAAATCGCGAACCTTCTGATCATAGATTTTCTGCTTATTATTCATCAAATGGTTCATACTCAAAGGAAGAAAACTACAATGCATCACCTGCACCATCAACACTAACAGAATTGAGTCCAAGAGCATGCAGTGGTCATTTTGAGGAGTGTTCCTTCAGCACAGCACAAAGCAGTCCCTATTACTACTCAGAAGTTTCAAGAGTGGATAATACAAAGGTTCCATTTTCTTTCCCTGAACCAGCCGACACAGAACCCATGTCTTATGACTACCCTTTATTCCCAAACTACATGGCCAACACAGAATCATCAAAGGCCAAAGCCAGATCACAGAGTGCACCAAAGGCAAGGCCGGATTCGTATGAGAGGCAGCCGAGCCGGAGAAGGGCTTCAATGGAAGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTCACTGCACAAAACTACCAATATCCATGGTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCTACAAGTACAGTGCTCACAAACTCTAATTACTGCACATGA 1305 0.459 MGRTGKWLRNLLTGKRDREKEKEKCGTNMCLLNGTTENPTTPVSTTTTTTTPKEKRRWSFRRSSASRELNLAESGVTASVTTVQNATTDAENDQRKHAMVAVAAAAPVPVICLTPDSNGLPTRCVEEAAAIKIQSVFRSYLARKALYALRGLVKLQALVRGHLVRKQARETLRCMQALVIAQARARAQRARMVSEGMADQKLSPYRITAEDNFMHMYNEMDSRLEENAKIVEMAVCESKGNSRGRNNGANREPSDHRFSAYYSSNGSYSKEENYNASPAPSTLTELSPRACSGHFEECSFSTAQSSPYYYSEVSRVDNTKVPFSFPEPADTEPMSYDYPLFPNYMANTESSKAKARSQSAPKARPDSYERQPSRRRASMEGRNVPRPVRMQRSSSHVGVTAQNYQYPWSIKLDRSIVSECGSTSTVLTNSNYCT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03662 434 MobiDBLite consensus disorder prediction 1 52 - -
Pumo3g03662 434 MobiDBLite consensus disorder prediction 349 396 - -
Pumo3g03662 434 SMART iq_5 148 169 IPR000048 GO:0005515
Pumo3g03662 434 SMART iq_5 125 147 IPR000048 GO:0005515
Pumo3g03662 434 MobiDBLite consensus disorder prediction 29 52 - -
Pumo3g03662 434 Gene3D - 125 174 - -
Pumo3g03662 434 MobiDBLite consensus disorder prediction 10 26 - -
Pumo3g03662 434 Pfam Protein of unknown function (DUF4005) 307 382 IPR025064 -
Pumo3g03662 434 PANTHER IQ-DOMAIN 5-RELATED 1 381 - -
Pumo3g03662 434 Pfam IQ calmodulin-binding motif 128 145 IPR000048 GO:0005515
Pumo3g03662 434 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Pumo3g03662 434 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Pumo3g03662 434 MobiDBLite consensus disorder prediction 367 382 - -
Pumo3g03662 434 MobiDBLite consensus disorder prediction 239 258 - -
Pumo3g03662 434 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03662 Pumo-Chr3 77369170 77371820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03662 1 432 IQD Protein Family AT4G14750 45.299 1.29e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03662 - - gmx:100810189 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03662 3 77369170 77371820 Pumo3g03662 3 77369170 77371820 ECH