Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03654 ATGGGAATAAGAGACTTTCATATCAAGCTTAAGGCATTCAGGGTGAAACGTTTTTTCTTTGGAAGAAGGAGAAATAGATGGAGTGCAAACAAGCCTTCATGGATGATTCCAATATCACATGGCCATCATGTGGTGGAGCATCATGTAATCAAAGGTGGTTCTGATGACTCTGACTTTGATTCAGTTGTGATACAGAGAGAGCAAGTGGATCACACAGAAATGTGGTATTTTGGAATCTTTGATGCTGTGGTTGGAGATGGAGTTACCAAGTATATGCAATCCCATTTCTTTGGCAAGAAGCTCAAAGAGTATCATATGAGGAGAAAAACCAAGGAAACACTGAAGAGAGCTTACCTAAGTGTAAGAGTAAAGATCAGAGAGGCACTGAAGCCAGAGGAGACATGCAGAATGGGTTCAACATCAGTGATGGTGATAAATGGAGAAAAGCTTGTGATAGCCAACATGGGAGATTACAGAACTGTTTTGTGCAGAGATGGTGTAGCATATCAGACAAATGGCAGACACAATCAATCAGCCAAGAGACATTGGTATCGCAGACTCTTTTCAGCATGTGAATCAGGCAATACAAAAGGTGCAAAGCATTCTAAAGGCTCAGAACTTGTGTTGGGAAGTGATAGGATCGACTCTGATACTGAATTTTTAATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTTATAAGACACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCTTTGATTAGGATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGACTGA 828 0.4106 MGIRDFHIKLKAFRVKRFFFGRRRNRWSANKPSWMIPISHGHHVVEHHVIKGGSDDSDFDSVVIQREQVDHTEMWYFGIFDAVVGDGVTKYMQSHFFGKKLKEYHMRRKTKETLKRAYLSVRVKIREALKPEETCRMGSTSVMVINGEKLVIANMGDYRTVLCRDGVAYQTNGRHNQSAKRHWYRRLFSACESGNTKGAKHSKGSELVLGSDRIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMSKSNISCLIIRFD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03654 275 SMART PP2C_4 46 272 IPR001932 -
Pumo3g03654 275 Pfam Protein phosphatase 2C 213 267 IPR001932 -
Pumo3g03654 275 Pfam Protein phosphatase 2C 75 176 IPR001932 -
Pumo3g03654 275 Gene3D - 45 275 IPR036457 -
Pumo3g03654 275 PANTHER PROTEIN PHOSPHATASE 45 273 IPR015655 GO:0004722|GO:0006470
Pumo3g03654 275 SUPERFAMILY PP2C-like 60 275 IPR036457 -
Pumo3g03654 275 CDD PP2Cc 60 274 IPR001932 -
Pumo3g03654 275 ProSiteProfiles PPM-type phosphatase domain profile. 56 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03654 Pumo-Chr3 77316481 77320249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03654 1 274 PP2C-type Phosphatase Gene Family AT3G23360 46.931 2.03e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03654 K19704 - gmx:100794054 493.426