Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03640 ATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAGGATATACTGACAGAAGATGAGGCCAGTAATCTTCAAGAAAAGGACTTCTCTGTTGGAATTAACAGAAGTGGAGCCCTCCAAAGTGATGGACGTCCTGCGGCTCCTAAACGAACTCAACAGGAACAACTGCAGCATTGGCAGAAAAATCGACGAATGCTTGCCTATTCTACAGTTGGAACACCTGATTATATTGCTCCTGAAGTTCTTCTGAAAAAAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGGTTTCCACCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAACTACTTTAAAATTTCCAGAAGAAGCTAAACTTTCAGCAGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTGGAGCAGAGGCTTGGAACCAAAGGAGCCGATGAAATAAAGGCTCACCCATGGTTCAAAGGTGTTGAATGGGACAAACTGTACCAAATGAAAGCTGCTTTCATACCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAAAAGTTTGAAGAGGTGGACAAGCAAACTGTACCTTCCTCAAAAGCAGGACCGTGGAGAAAGATGCTGCCATCTAAAGATATTAACTTCGTCGGCTACACATACAAGAATTTTGAAATCGTGAATGATCATGAAATACCTGGAATTGCTGAATTGAAGAAGAAGAGCACAAAACCTAAAAGACCATCTATTAAGGCTCTATTTGATGATGAATCAGTTATGGCTGCCAATCAACCTGTCAGAGGGAGCTTCTTAAACCTCTTGCCTCCTCAAATGGAAGTTCCTGAAAAAAGTGAATCACATTGA 909 0.4059 MEYLPGGDMMTLLMRKDILTEDEASNLQEKDFSVGINRSGALQSDGRPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGFPPFYSDEPMLTCRKIVNWRTTLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGADEIKAHPWFKGVEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDKQTVPSSKAGPWRKMLPSKDINFVGYTYKNFEIVNDHEIPGIAELKKKSTKPKRPSIKALFDDESVMAANQPVRGSFLNLLPPQMEVPEKSESH 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03640 302 Gene3D Transferase(Phosphotransferase) domain 1 65 193 - -
Pumo3g03640 302 ProSiteProfiles AGC-kinase C-terminal domain profile. 174 246 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo3g03640 302 SMART pkinase_C_6 174 238 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo3g03640 302 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 1 216 - -
Pumo3g03640 302 Pfam Protein kinase domain 70 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03640 302 SMART serkin_6 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03640 302 SUPERFAMILY Protein kinase-like (PK-like) 68 223 IPR011009 -
Pumo3g03640 302 ProSiteProfiles Protein kinase domain profile. 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03640 302 FunFam Non-specific serine/threonine protein kinase 72 191 - -
Pumo3g03640 302 Pfam Protein kinase C terminal domain 192 236 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03640 Pumo-Chr3 77074254 77082665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03640 1 296 AGC Kinase Gene Family AT4G14350 70.809 7.20e-176 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pumo3g03640 Pkinase 6.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03640 K08790 - gmx:100795087 582.793