Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03622 ATGCATGCTCAAGCTGAAGAATTTCTTCATGAAGAAAAAGATTTTGAATCTTCTTCCTCCCCACAGAGCCTTGAGTCTGAGCAACAAAGTGCACCTGATGTACCTGCCTCTGATAGCGACTCTTCAAAACTCCAAGAGCAAAGAATGGAAGGAAATGATGATGCTTCTGGGGTTGTTCCATCTATAGATGGAGAAAATACTCTTGAAGAAAGCAGCAACTCATCTGTATCTAGTCCACTAATGACTCCACCAAGCTCAGGAAATGGTTCAAAATTACGTGACTCTAGTATACCTGTGACAGAAGGAGAAAGATCAGTCATTGAACAATTTGAGCATGGTGTTTATGTCACACTCATAGTACTACCTAGTGGTTACAAAGTTTTCAAACGAATTAGATTCAGTAAACGAAGATTCAACGAGCAGCAAGCAGAAGAATGGTGGAACCAAAACAAAGATAAGGTGCTTAATAAATACAGTCCACCAGCCACAAAAAATGCAATTACCGGATCATCTAATACCCCTCCACCTGCTGAAGAGAAAAGTGAGGCATTACCTTCTTCCTAA 564 0.4043 MHAQAEEFLHEEKDFESSSSPQSLESEQQSAPDVPASDSDSSKLQEQRMEGNDDASGVVPSIDGENTLEESSNSSVSSPLMTPPSSGNGSKLRDSSIPVTEGERSVIEQFEHGVYVTLIVLPSGYKVFKRIRFSKRRFNEQQAEEWWNQNKDKVLNKYSPPATKNAITGSSNTPPPAEEKSEALPSS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03622 187 MobiDBLite consensus disorder prediction 1 101 - -
Pumo3g03622 187 MobiDBLite consensus disorder prediction 65 95 - -
Pumo3g03622 187 Pfam Transcription factor regulating root and shoot growth via Pin3 104 158 IPR013591 -
Pumo3g03622 187 MobiDBLite consensus disorder prediction 157 187 - -
Pumo3g03622 187 MobiDBLite consensus disorder prediction 1 18 - -
Pumo3g03622 187 MobiDBLite consensus disorder prediction 157 177 - -
Pumo3g03622 187 ProSiteProfiles BRX domain profile. 104 159 IPR013591 -
Pumo3g03622 187 PANTHER PROTEIN BREVIS RADIX-LIKE 1 25 158 IPR044532 -
Pumo3g03622 187 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03622 Pumo-Chr3 76819618 76821031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03622 101 158 Major Intrinsic Protein MIP AT1G31880 41.379 2.34e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03622 - - gmx:100778984 311.612