Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03596 ATGGAGCTTTCCATCAACGAAAGAAGCCTTGTTAGGGAAAGACAAGAGGAAGAAGATGAAGAAGAAAGAGACAACGGTGATGAACCCAAAGAGGGTGCAGTTGACGTTGGAACACGCAGGCCCAGAGGGAGACCCCCAGGTTCCAAAAACAAGCCCAAACCCCCCATCTTCGTCACCAGGGACAGCCCAAACTCCCTCAGAAGCCATGTCATGGAGGTTGCTGGTGGCGCCGACGTGGCGGAAAGCGTGGCCCAGTTCGCACGGAGGCGCCAGCGTGGGGTGTGTGTCCTCAGTGGGAGCGGCTCCGTGGCCAACGTTACTCTCCGGCAGCCTGCGGCCCCGGGAGCCGTCGTGGCACTTCATGGAAGGTTTGAGATTTTGTCCCTGACCGGGGCGTTTCTACCTGGTCCTGCCCCGCCAGGAGCTACAGGACTTACTGTATATCTTGCTGGAGGGCAAGGCCAGGTAGTGGGAGGGAGCGTTGTGGGCTCCCTTGTGGCAGCAGGACCAGTAATGGTGATTGCTGCCACTTTTGCTAATGCTACCTATGAGAGGTTGCCACTTGAGGAGGAGGAAGATGACGGTGGTGGTAGCGTGCAAGGAGGAAGTACCCTGGGAGGGTCTCCTCCTGGAATCGGTAGCAGTGGTGGTGGCAGTGGCGGTAGTGGTGCGGCCCACTTGCCAGGTGGGATTCCTGATCCTTCTTCTTTGCCTCTGTATAATCTTCCACCAAATCTTCTCCCCAATGGAGGCCAAGTGGGGCATGAGGCTTTTGCTTGGGCTCATGGCCATGGAAGGCCGCCTTACTGA 810 0.5765 MELSINERSLVRERQEEEDEEERDNGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGGSVQGGSTLGGSPPGIGSSGGGSGGSGAAHLPGGIPDPSSLPLYNLPPNLLPNGGQVGHEAFAWAHGHGRPPY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03596 269 Gene3D - 66 193 - -
Pumo3g03596 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 67 179 IPR005175 -
Pumo3g03596 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 263 IPR014476 GO:0003680
Pumo3g03596 269 CDD DUF296 67 150 IPR005175 -
Pumo3g03596 269 MobiDBLite consensus disorder prediction 1 16 - -
Pumo3g03596 269 MobiDBLite consensus disorder prediction 1 64 - -
Pumo3g03596 269 PIRSF ESCAROLA 3 269 IPR014476 GO:0003680
Pumo3g03596 269 MobiDBLite consensus disorder prediction 189 235 - -
Pumo3g03596 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 63 191 - -
Pumo3g03596 269 FunFam AT-hook motif nuclear-localized protein 66 193 - -
Pumo3g03596 269 ProSiteProfiles PPC domain profile profile. 63 202 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03596 Pumo-Chr3 75713787 75715633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03596 29 269 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 68.980 1.93e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03596 - - gmx:102663643 359.377