Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03595 ATGTTAAAGGCAGTGTCATTTGAACTGTTGTTGATTTGCTTGCTACTTCTCACATGTGTGTCTGCAACAGATAATGGTTTTCCCAGATGTAACTGTGATGATGAGTCCAGCTTGTGGACTATTGAGACCATTCTGGAGTGCCAGAGAATTGGTGATTTTCTGATTGCTGTGGCCTACTTTTCCATCCCCGTTGAGCTGCTTTACTTTGTTAGTTGCTCAAACTTCCCATTCAAATGGGTCCTCTTTCAGTTCATTGCTTTCATTGTACTTTGTGGAATGACACATTTGTTGAATGGGTGGACTTATGGTCCCCACACTTTTCAACTCATGGTGGCACTTACTGTCTTCAAAATTCTCACTGCCTTGGTGTCATGTGCAACTACCATAACCCTCCTCACCTTGATCCCTATGCTGTTGAAAGTGAAGGTTAGGGAATTGATGCTGAAGAAAAAGACCTGGGATCTTGGGAGGGAGGTTGGAATCATAATGAAACAGAAGGAGGCTGCAATGCATGTGAGGATGCTCACTCAGGAGATTCGCAAGTCGTTGGATAGGCATAAGATTCTGTACACCACCTTGGTTGAGCTGTCTAAGACACTTGGTTTGCAAAATTGTGCAGTGTGGATGCCAAATGTTGAGAAAACTAAGATGAACCTTACACATGAATTGAATGGGAGGAATGTTAACTGTTCTATACCCATAACTAATCCAGATGTTATGAGAATTAAGGGAAGTGATGAAGTGAACATAATTGATTCTGATTCAGTACTTGCCACTGCCAGTAGAGGAGTTTCTGGTGTGGCAGGACCAGTTGCTGCAATCCGAATGCCGATGCTTCGGGTTTGCAATTTCAAAGGGGGAACGCCGGAGCTAAGGCAGACGTGTTATGCCATTTTGGTTTTGATTCTTCCTGGCGTCGAGCCTGGATCGTGGAGCCCTCAAGAGCTGGAGATCATTAAGGTGGTTGCTGATCAGGTGGCTGTGGCTCTGTCTCACGCTGCGATTCTTGAAGAGTCTCAGCTCATGAGGGAGAAGTTGGAGGAGCAAAATCGAGCTTTGCAAGTGGAAAAGATGAATGCTATGATGGCGAGCCAGGCGAGAGCTTCGTTTCAGAAGGTCATGAGTAATGGAATGAGAAGGCCAATGCACTCAATTTTGGGGTTGCTTTCGATGATGCAAGATGAGAATTTGAAGAGTGAACAGAAACTTATTGTGGATTCAATGCTAAGGATCAGCAGTGTCTTGTCAAACTTGATAAATGATGCCATGGACTACTCAGCAAGGGATGATGGAAGATTCCCTTTGGAGATGAAACATTTTGGATTGCATGCCATGGTGAAAGAGGCAGCTTGTCTTGCCAAGTGCATGTGTGTTTATAGGGGCTTTGGTTTTGTGGTTGATGTTGATAAGTCTTTGCCAGACAATGTTATAGGTGATGAAAAGAGGGTTTTTCAGGTGATTTTGCATATGGTAGGGAATGCAATAAATGGTAACTTTGGAGGAGGGGTTCTTGTATTTCGAGTTTTTGCAGAAACTGGAAGTCAAGGAAGGAATGACCAGGGGTGGACAACCTGGAGACCAAGCTCTTCTAGTGGGGATGTAAATATTAGATTTGAGATAGGGATCAATACTGGTGATCCAGACTTGGAGAGTTCAGTTCCTTCAGGGCAGCTTGCGGGTACAAACCGCGCTAGTGATAGGGTTGAGGACAGATTGAGCTTTAGCATTTGCAAGAGGATAATCCAGTTGATGCAAGGGAACATATGGTTAGTACCAAATGCTCAAGGTTTTCCTCAAGTCATGGCCCTTTTTCTTCGGTTTCAACTGCAGCGATCTATTGCCATATCCATCTCTGAAGCCGGGGAAAATTCTGAGCCATCCAATTCAAATTCTTTCTTCAGAGGTCTGCAAGTCTTGTTGGCCGACAACGATGATGTAAATAGAGCAGTGACACAGAAGTTGCTTCAGAAACTAGGCTGTGTTGTGACTTCTGTCTCTTCAGGATTTGAATGCCTCAGTGTCATTGGACCTGCTGGATCTTCCTTTCAAGTCATTCTTTTGGATCTTCACATGCCTGAGCTTGATGGATTCGAAGTTGCGACGAGGATTCGCAAGTTTGGAAGCCAGAATTGGCCGGTGATTGTTGCCTTGACTGCAAGCACAGAAGATTTGAGGGAAAGATGCATGCAAATTGGCATGAATGGAGTCATAAGAAAGCCAGTTTTGTTGCATGGAATTGCCAGTGAACTCAGAAGAATACTATTGCAGGGAAATAGTGTCATGTGA 2286 0.4418 MLKAVSFELLLICLLLLTCVSATDNGFPRCNCDDESSLWTIETILECQRIGDFLIAVAYFSIPVELLYFVSCSNFPFKWVLFQFIAFIVLCGMTHLLNGWTYGPHTFQLMVALTVFKILTALVSCATTITLLTLIPMLLKVKVRELMLKKKTWDLGREVGIIMKQKEAAMHVRMLTQEIRKSLDRHKILYTTLVELSKTLGLQNCAVWMPNVEKTKMNLTHELNGRNVNCSIPITNPDVMRIKGSDEVNIIDSDSVLATASRGVSGVAGPVAAIRMPMLRVCNFKGGTPELRQTCYAILVLILPGVEPGSWSPQELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQVEKMNAMMASQARASFQKVMSNGMRRPMHSILGLLSMMQDENLKSEQKLIVDSMLRISSVLSNLINDAMDYSARDDGRFPLEMKHFGLHAMVKEAACLAKCMCVYRGFGFVVDVDKSLPDNVIGDEKRVFQVILHMVGNAINGNFGGGVLVFRVFAETGSQGRNDQGWTTWRPSSSSGDVNIRFEIGINTGDPDLESSVPSGQLAGTNRASDRVEDRLSFSICKRIIQLMQGNIWLVPNAQGFPQVMALFLRFQLQRSIAISISEAGENSEPSNSNSFFRGLQVLLADNDDVNRAVTQKLLQKLGCVVTSVSSGFECLSVIGPAGSSFQVILLDLHMPELDGFEVATRIRKFGSQNWPVIVALTASTEDLRERCMQIGMNGVIRKPVLLHGIASELRRILLQGNSVM 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03595 761 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 27 756 - -
Pumo3g03595 761 FunFam Ethylene receptor 634 757 - -
Pumo3g03595 761 Gene3D - 616 753 - -
Pumo3g03595 761 PIRSF Ethylen_sen_hybr_HK 1 761 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Pumo3g03595 761 Gene3D - 332 429 - -
Pumo3g03595 761 CDD REC_ETR-like 636 750 - -
Pumo3g03595 761 Pfam GAF domain 184 330 IPR003018 GO:0005515
Pumo3g03595 761 Gene3D - 163 331 IPR029016 -
Pumo3g03595 761 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 357 432 IPR036097 GO:0000155|GO:0007165
Pumo3g03595 761 SUPERFAMILY CheY-like 633 754 IPR011006 -
Pumo3g03595 761 SUPERFAMILY GAF domain-like 187 333 - -
Pumo3g03595 761 SMART HisKA_10 366 431 IPR003661 GO:0000155|GO:0007165
Pumo3g03595 761 MobiDBLite consensus disorder prediction 545 564 - -
Pumo3g03595 761 Pfam Response regulator receiver domain 638 741 IPR001789 GO:0000160
Pumo3g03595 761 CDD HATPase_ETR2_ERS2-EIN4-like 472 605 - -
Pumo3g03595 761 MobiDBLite consensus disorder prediction 548 562 - -
Pumo3g03595 761 SMART REC_2 636 754 IPR001789 GO:0000160
Pumo3g03595 761 ProSiteProfiles Response regulatory domain profile. 637 754 IPR001789 GO:0000160
Pumo3g03595 761 CDD HisKA 364 426 IPR003661 GO:0000155|GO:0007165
Pumo3g03595 761 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 420 508 IPR036890 -
Pumo3g03595 761 Gene3D - 430 607 IPR036890 -
Pumo3g03595 761 FunFam Ethylene receptor 4 333 427 - -
Pumo3g03595 761 SMART gaf_1 184 340 IPR003018 GO:0005515
Pumo3g03595 761 Coils Coil 336 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03595 Pumo-Chr3 75621940 75626485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03595 24 754 Miscellaneous Gene Families AT3G04580 57.739 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo3g03595 GAF 6.8e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03595 K14509 - gmx:100802948 1380.54