Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03586 ATGGCAACAAGCGAAGAAGTGGTTGCGGCGGTGCCGGCGCCGGCGCCGGAGGCAGTGTTGAAGCACAAACTGGAGAGAAAATGGACGTTTTGGTGCGACAACCAATCCAAACCCAAACAGGGCGCTGCTTGGGGAACCTCTCTTCGCAAGGTCTACACTTTCGACACCGTTGAAGAGTTCTGGTGTTTGTATGATCAGGTATTCAAGCCCAGCAAGTTGCAAAACAATGCGGATTTTCACTTGTTCAAGACAGGGATTGAGCCAAAGTGGGAAGATCCCGAGTGTGCCAATGGAGGAAAGTGGACTGTCACCAGCAACAGCGGAAGGAAGGCTAACCTTGATAACATGTGGCTTGAAACTCTGATGGCTTTGATTGGGGAGCAATTTGACGATGCTGAGGACATATGCGGTGTGGTTGCGAGTGTGCGCCAGTGGCAGGACAAACTTTCGTTGTGGACAAAGACAGCGGCAAATGAGGCTGCCCAGATGAGCATCGGGAGGAAGTGGAAGGAAATCATTGATGTTAACGACAAGATAACATACAACTTTCATGATGATTCTAGAACCAAAGGAGCAACAAAGGGTCGATACACCGTATAA 600 0.4967 MATSEEVVAAVPAPAPEAVLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQVFKPSKLQNNADFHLFKTGIEPKWEDPECANGGKWTVTSNSGRKANLDNMWLETLMALIGEQFDDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVNDKITYNFHDDSRTKGATKGRYTV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03586 199 FunFam Eukaryotic translation initiation factor 4E 13 199 - -
Pumo3g03586 199 Gene3D RNA Cap, Translation Initiation Factor Eif4e 16 199 IPR023398 -
Pumo3g03586 199 ProSitePatterns Eukaryotic initiation factor 4E signature. 78 101 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Pumo3g03586 199 SUPERFAMILY eIF4e-like 10 192 IPR023398 -
Pumo3g03586 199 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 17 190 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pumo3g03586 199 Pfam Eukaryotic initiation factor 4E 23 181 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03586 Pumo-Chr3 75357123 75360286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03586 1 199 Eukaryotic Initiation Factors Gene Family AT5G35620 64.878 1.74e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03586 K03259 - gmx:100499799 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03586 3 75357123 75360286 Pumo3g03586 3 75357123 75360286 ECH