Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03572 ATGGTCATGGCTACTGTGAAAAAGGGGAAGCCTGATCTTAGGAAGAAGGTATTGCCAGCCGTTGTTGTGAGACAGCGCAAGCCGTGGCGAAGAAACGATGGTGTCTACATGTACTTTAAAGATAATGCAGGTGTTATTGTAAATCCGAAGGGAGAAATGAAAGGCTCTGCCATAACTGGGCCTATTGGGAAGGAGTGTGCTGATCTGTGGCCCAGAATTGCAAGTGCTGCCAATGCCATTGTCCGAGTGTTTTCAAGTCATCAAACAATTTTGAACTTGGTCAACATTGAAATCAATTTTTTAGGGGGAAAACGTGTTAACCGTTGA 327 0.4434 MVMATVKKGKPDLRKKVLPAVVVRQRKPWRRNDGVYMYFKDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIVRVFSSHQTILNLVNIEINFLGGKRVNR 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03572 108 Gene3D Ribosomal protein L14 1 81 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pumo3g03572 108 Pfam Ribosomal protein L14p/L23e 1 81 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo3g03572 108 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 80 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo3g03572 108 SUPERFAMILY Ribosomal protein L14 1 81 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pumo3g03572 108 SMART Ribosomal_L14_2 1 81 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo3g03572 108 ProSitePatterns Ribosomal protein L14 signature. 20 46 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03572 Pumo-Chr3 74669869 74675635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03572 1 81 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 95.062 2.02e-53 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03572 K02894 - thj:104800627 163.696