Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03555 ATGTCGCTGCCAGATTGTCCCGCGGCCCAACTGGCCCAATTCCTCGGCCCAAACACCACAGACGCCTCCGGCGCCGCCTCCCTCATCTGCGACCAGTTCACCGCCGTAGGAAACAAGTTCACCGACACGGCCTTCGCGATTGACAACACCTATCTCCTTTTCTCCGCGTACCTCGTCTTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGTCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCCTTCGGAGCCCCCTCCAACGGCTTCATCGGCAAACACTTCTTCGGCCTCAAGGACCTTCCATCTTCCTCCTTCGACTACAGCAACTTCCTCTACCAATGGGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATTGCCGAACGCACCCAGTTCGTCGCGTACCTCATCTACTCCTCCTTCCTCACCGGCTTCGTCTACCCCGTCGTCTCCCACTGGTTCTGGTCCCCCGACGGCTGGGCCTCCGCCTTCAAACTCAGCGACCGGCTATTCTCCACCGGCGTGATAGACTTCGCCGGCTCCGGCGTAGTCCACATGGTCGGCGGAGTAGCCGGCCTCTGGGGAGCACTGATCGAAGGTCCGAGAATCGGACGCTTCGATCACGCAGGACGCGCCGTGACCCTGCGGGGCCACAGCGCGTCCTTGGTAGTCCTCGGAACCTTCATGCTTTGGTTCGGCTGGTACGGCTTCAACCCCGGTTCCTTCAATAAAATCCTGCTTACCTACGGTGACTCAGGAAATTACTACGGTCAATGGAGCGCGGTTGGGAGAACCGCGGTAACAACTACTTTAGCCGGGTCTACGGCTGCGTTGACCACGTTGTTCGGGAAACGAGTGATATCCGGTCACTGGAACGTGACCGACGTTTGCAACGGTTTGTTAGGCGGCTTCGCCGCCATAACAGCCGGTTGCTCGGTTGTGGAGCCCTGGGCGGCGATAGTGTGTGGATTCGTTGCTTCTATGGTTTTGATTGCGTGCAACAAATTAGCAGAGAAGGTTAAATTCGACGATCCGTTAGAAGCGGCGCAGTTGCACGGAGGGTGCGGCGCGTGGGGGGTGATATTCACTGCTTTGTTTGCGAAGGAGGAGTACGTGGCACAAGTTTACGGTACGGGGAGGGGGCACGGGTTGTTCATGGGTGGTAGAGGGAAGTTGTTGGCGGCGCACGTGATTCAGATTTTGGTTATTGTCGGGTGGGTTAGTGCGACCATGGGACCCTTGTTTTGGGGATTGAACAAACTGAAGTTGTTAAGGATTTCTTCCGAGGATGAGCTTGCGGGTATGGATCTGACCCGACACGGAGGGTTCGCTTATGCTTATGAGGATGATGAGACGCAGAAGCATGGGATTCAGTTGAGGAAGGTTGAACACAACTCCTCGTCCACACCCACCACTGATGAATGA 1503 0.5795 MSLPDCPAAQLAQFLGPNTTDASGAASLICDQFTAVGNKFTDTAFAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGKHFFGLKDLPSSSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASAFKLSDRLFSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVTLRGHSASLVVLGTFMLWFGWYGFNPGSFNKILLTYGDSGNYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRVISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASMVLIACNKLAEKVKFDDPLEAAQLHGGCGAWGVIFTALFAKEEYVAQVYGTGRGHGLFMGGRGKLLAAHVIQILVIVGWVSATMGPLFWGLNKLKLLRISSEDELAGMDLTRHGGFAYAYEDDETQKHGIQLRKVEHNSSSTPTTDE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03555 500 Gene3D Ammonium transporter AmtB like domains 28 490 IPR029020 -
Pumo3g03555 500 SUPERFAMILY Ammonium transporter 47 452 - -
Pumo3g03555 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pumo3g03555 500 PANTHER AMMONIUM TRANSPORTER 24 475 - -
Pumo3g03555 500 Pfam Ammonium Transporter Family 51 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo3g03555 500 FunFam Ammonium transporter 29 485 - -
Pumo3g03555 500 NCBIfam ammonium transporter 48 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03555 Pumo-Chr3 74415847 74417889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03555 6 497 Inorganic Solute Cotransporters AT4G13510 80.439 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03555 K03320 - gmx:100796502 895.575