Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03553 ATGAGAAATTCTATTGGTCAACACGCTTTTGCTTTACACACCATTGGTCTATATAGCGTGCAACAAGGCAAGACACCAATCTTTGCAAATTTTGCATGGGAAAGGATTGATGAACCAGTGATGAGATCTTATACCGAGGCTACAAACAGCTCCTATGTAGAGACCAAGGTGAGTGCCTTGGTATGGCATTGCCGTGATGCCGATCCTGATTTTGGATCTTGGCAAGCCATGGATCACCTTGAAAGTGTACTTGCAAATGAGCCATGTAGTTGTCAAAAAGGGATAACTTATCCTTGA 297 0.4276 MRNSIGQHAFALHTIGLYSVQQGKTPIFANFAWERIDEPVMRSYTEATNSSYVETKVSALVWHCRDADPDFGSWQAMDHLESVLANEPCSCQKGITYP 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03553 98 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 94 IPR001830 GO:0003824|GO:0005992
Pumo3g03553 98 Pfam Trehalose-phosphatase 25 94 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03553 Pumo-Chr3 74339701 74351598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03553 29 94 Trehalose Biosynthesis Gene Families AT1G06410 57.971 5.43e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03553 K16055 - gmx:100787744 102.449