Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03548 ATGGCAACTGTGGCGAATTTTCCTCCGGATTCAATACCAGAACTTGCATGTTACAATACGACAATGGATCTTTCCAACAAAATCTGGAGAAGTAGTAATGTCATTGGAGATCGTGTTCCTCTTTTATCTATTCAAATTGCCTACAATGTCCTGCTTTCTACTTTTTTTCACCGCATCTTCAAGCCATTCCACCTGCCTCTTATGGTTGCCCAGATGCTTGGTGGTGTTATTTTGAGTTCATCATTTTTGGGAAGAATCCCTGGAATTTTTAACTCGGTTTACCGTACAGAAGGAATCCTGGCAGTTGAAACCTTTGCAAATCTGGGAGTTATGTACTATGTGTTCCTTAATGGGTTGGAGATGAACTGTGACACCATTCTGAGATCAAGCAAGAAGGCTATAACCATTGCCATTGCTTGCCTTCTCATTCCAATTGTGGGGGGTGCTGGTTTTCTTGCTCTAGAGCATAGGGTATCAGGAGGTGCACCAAACACTTTCGTTACCAATAAAGGGTATTTCTTTTGCTGTGCAGTTCTTGCTGTCACAGGTTTTCCAGTCCTTGCTAGGCTCCTATCAGGGCTCAAGATCCTCTACACAAGGCTTGGCAAAGATGCCTTAACAGCAGCCATGTTAATTGATACATATGGGTGGATTTTGTTCTCAATCTTGATTCCCTATTCCCATGAGGGTGGAAAACCACTCCTCTCATCAATATGCACCTTGTTGTTCATTGTGTTCTGCTTCTGCGTGGTGCGTCCCATCCTGACTCGCATGATCGAACACAGATTCAGGTTGGAGACATGGGACTCCTCAAGGATGCTGGATGTGATGATTGGACTTTTTATTTGTTCATACATCACAGATTTGCTTGGTGCACACCATGTTGTTGGGGCCTTTGTGTATGGACTAATTTTGCCTAGTGGGAAATTTGCTGATTTGATGATGGAAATTTTGGATGATTTTGTTACTGCGCTTATTGTGCCCGTCTACTTTGCTAGTTTTGGCTTTAGACTAAACCTGGACGCGCTTTGGTCTGTACACAATTCGGTTTTGTTTCCGATCGTCATGGTGTTGTTGTTAGCCATCCCAAAAGTTTTAGGCTCTATGATGGTTACTTTCTACTTTGGTATGTCTGCTAGAGATGGATTGGGCCTTGGATTGCTCCTCAACACCAAGGGCATCATGGCAGTGCTTATGCTAAGCGTTACCTGGGACAAAAGTCTTTTGGACCCCTATGCATTCACAATTATGATGCTTGCTGTAATATTCATGACTGTGTTGGTCCCTCCCTTGATCAATGTGATATACAAGCCAAAACTCCGGTTCATGCAGACCCAGCAAAGGATTGTACAGAAGCTAAGGTGTGATGCAGAACTTCGAGTTGCGGCTTGTGTCCACAATGCTCACCAAGCCACTGGCATGATCCATGTCCTTGAAGCCACAAATGCCACCAGAATTTCCCCTTTACATGTCTCAGTCCTTCACCTTGTTGAACTCACTAGACATGGCACTGGCCTTCTTGTTGCCCAAATGGAAAATCCAAGTCTTCAAGGGGCACTTTCTTACTCATCAAGAAAAAGTTTTCAAAGGGGGTCAGCAGAAAGCCATTATGGATCACAAAACGAGTTTGAGAGCATAGCCAAGGCATTTGAAGAGTTTGCAGAGGAATACAAAGCAGTGAGATTTGACACATCAGGTATTGTGTCAACCTATGAAACCATCCATGAGGACATATACACTGTAACACAAGAGAAACGTGCAAACCTAATTCTCCTTCCCTTTCACAAACAACTAAGCTCAGAAGGTGTGTTGGAAACAACCAACAGTGCATTCGGTGACATAAACCAAAATGTGATGCAAGAACCACCTTGTTCTGTGGGGATCTTTGTGAACCGGGGACTCGGGTCATTGTTGAAAACAAAAATGAGCATCGTTATGGTCTTCGTTGGAGGGCCTGACGACCGTGAAGCCTTGTCGATCGCGTGGAGAATGGCAGGGCATTCAGGCACAAAACTGCATGTGGTGAGGCTTCTTATGTCAGGTAGTGAGGCTGCAGAAGAAGAAGAGGCATTCCATTGTGATTCTAATGGACTTTTGTCTACAGTGATGGACAATGTGATGCAGAAAGAGTTGGATGATGAGCAAATATTACACTTCAGGCACAAGGGGGTGCACAATAATGACACCATTACTTACTCAGAGAAGGAAGTGGGAACAGAATCTGGTGAGGAGATTCCTATGATCCTCAATGAGATAGACAAATCTGGGTATGACTTGTACATTTTGGGACAAGGGAGTGGCAAGAACTACACAGCTTTTCGAAAGTTGTTGGAATGGTGTGACAACCCTGAACTTGGGGTCATGGGGGACATTGTAGCTTCAACCAGCTTTGGCACAAACTCCTCACTGCTTGTTGTGCAACAATACACCATGGAGAGAAAGCCTAAACCTCAATGTTGCAGAAAATGTCACTTCAGATCCTAG 2484 0.4408 MATVANFPPDSIPELACYNTTMDLSNKIWRSSNVIGDRVPLLSIQIAYNVLLSTFFHRIFKPFHLPLMVAQMLGGVILSSSFLGRIPGIFNSVYRTEGILAVETFANLGVMYYVFLNGLEMNCDTILRSSKKAITIAIACLLIPIVGGAGFLALEHRVSGGAPNTFVTNKGYFFCCAVLAVTGFPVLARLLSGLKILYTRLGKDALTAAMLIDTYGWILFSILIPYSHEGGKPLLSSICTLLFIVFCFCVVRPILTRMIEHRFRLETWDSSRMLDVMIGLFICSYITDLLGAHHVVGAFVYGLILPSGKFADLMMEILDDFVTALIVPVYFASFGFRLNLDALWSVHNSVLFPIVMVLLLAIPKVLGSMMVTFYFGMSARDGLGLGLLLNTKGIMAVLMLSVTWDKSLLDPYAFTIMMLAVIFMTVLVPPLINVIYKPKLRFMQTQQRIVQKLRCDAELRVAACVHNAHQATGMIHVLEATNATRISPLHVSVLHLVELTRHGTGLLVAQMENPSLQGALSYSSRKSFQRGSAESHYGSQNEFESIAKAFEEFAEEYKAVRFDTSGIVSTYETIHEDIYTVTQEKRANLILLPFHKQLSSEGVLETTNSAFGDINQNVMQEPPCSVGIFVNRGLGSLLKTKMSIVMVFVGGPDDREALSIAWRMAGHSGTKLHVVRLLMSGSEAAEEEEAFHCDSNGLLSTVMDNVMQKELDDEQILHFRHKGVHNNDTITYSEKEVGTESGEEIPMILNEIDKSGYDLYILGQGSGKNYTAFRKLLEWCDNPELGVMGDIVASTSFGTNSSLLVVQQYTMERKPKPQCCRKCHFRS 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03548 827 Gene3D - 41 443 IPR038770 -
Pumo3g03548 827 PANTHER CATION/H + ANTIPORTER 20 810 - -
Pumo3g03548 827 Pfam Sodium/hydrogen exchanger family 50 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03548 Pumo-Chr3 74218580 74222557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03548 9 809 Antiporter Super Family AT2G13620 34.975 1.55e-162 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03548 - - gmx:100792990 1342.02