Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03521 ATGCCTAGAAAAAATAGTCTTAGTGTTGTTGACAAGCATCATGATGAAGTGGAATCTTATATGGAGAAATTAATGAATACTCAAAATTGTTGTGAGTCTCAATCAAATGGTAGCATTGATGTTGAACAAAATGCTGAATCAGGTTCTTTGGAGGCAAGGAAGGTTCGTGGACCTACCTTGTTAAAAGACATATGGAATATGTCTCCGGGAAAGAGAATTGATGTGCAATTTAATAGTCGCAACCAAGCCATAGGAAAGGAGGGTCGGAAGCTTTCTAGTTTTTTGGGCATTTTAGCTAGAAACCCAAGATTAGCTCCTTTAAACATAGAGGATTGGAGACATTTTGATCAAGATCAAAAAAAGAGATTGGTGGAGCTTGTGAGGAGGAAATTCTCAATCTCTGTACGTGGTGAAGAGTTTGTCAAAAAATCAATTGGAAAGAAATGGAAAGATTATAAATGTGAATTAAGGTGTACATATATGACAAAGTACAAGACCAAAGATGCCTTAATGAAAAATAGACCAAAACGTATACCAATGGACCAATGGATCGGTCTTGTTTCTTATTGGCTGTCTGACAAAGCAAAGAAGCGTAGCCAAGCAAATAGATGCAATAGAACAAAGCAAAAGATGTCTCACACTGGTGGATCTAAAAGCATTGGAACTTTAATGGCTGAAAAGGCCAAAGATGGGATAGAACCTACTAGGGCAGAAATTTTCATACTAACTCATAAGAAGCGTAAAGATGGAAGACCATTGGATGAGGAGTCTGCAAAAATAGTGGATATGATTCAAATAAAGTTGAACAATGGTGAAACATGTAATGAACAACCCACCGGTAGTGTTGCTTGGAAAGGAGATGTATACTCCCAAGTATTGGGAGAAGAAAGAAGTGGCTATGTTCGTGGCTTGGGACTTGGTCCAACTCCTTCTCAATTATGGGGTACTAAATCTAATATTCTTTCTAGTAACATGACTAATGAGGTAGTACAAATGTTGGAGCAAGAATTGAGGGAGTTAAAGAAGTCAAAGGAGAAACATGATGAAGAAATGGATTTGATGAAACAAAATCAAGACAAGTTAGTATCGGAGTTATCTTTCATGAGAAAAGTGTTAAATAAATATTTTCCTAAGGAGTTATCTATGGCTCAAAACTTTGGAAGCTCATTTGGACAGGTCCATGATACTAATAGTGGTTTTGAACAAGCACATTATGTTGAAAAGAAAATTCCAACTCCTCAAGGTAATATGTTCAAGCCAAGTGGTTCAATCAAGCCTGAGGGTCTGGACGAAGGTGATGGAAGATGGCATTATAATTCTGATAATCTAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCTTTGGCTGGAGTGATCTCTTTAGCATCTTCTGAAACTGATATTAAGTATGATGAGATCAATGGTATCATGAAAGATTTTGATGAACTTGACCATCTTGCTTCTACTGGCCTCCACCTTGGGGACACCAAATGCATGGTAATCCAAGAAGAGCCAGAAGCCATCATTTGTGAAAAGAAGAATGTGGACCCTAAAACTGAAAAAAGGAAGAAAAGTACTGCTTCTGTTGATGATATCACTTCCTTACTAAAGCTTGTGAGAAAAGATAATGATGATGCTGTTCGGAAACTAGCAGCAGAGGCACTTGCCAGTCTTGCCACAGATGTCTTTCTTGTTTCTTACCAGCAATGCAGAGAAGGCCAGGATGTCCTCCCTGAGCAAATTAAAGCGGTGCTTTTGGATTCAGCAGGCTTCCATGGAATGCTTGATAAATGCTTCCCCCTTACAGAGGAACCAACCATAGTTGCTGTAGCTTGCAGTTTGTAA 1851 0.3857 MPRKNSLSVVDKHHDEVESYMEKLMNTQNCCESQSNGSIDVEQNAESGSLEARKVRGPTLLKDIWNMSPGKRIDVQFNSRNQAIGKEGRKLSSFLGILARNPRLAPLNIEDWRHFDQDQKKRLVELVRRKFSISVRGEEFVKKSIGKKWKDYKCELRCTYMTKYKTKDALMKNRPKRIPMDQWIGLVSYWLSDKAKKRSQANRCNRTKQKMSHTGGSKSIGTLMAEKAKDGIEPTRAEIFILTHKKRKDGRPLDEESAKIVDMIQIKLNNGETCNEQPTGSVAWKGDVYSQVLGEERSGYVRGLGLGPTPSQLWGTKSNILSSNMTNEVVQMLEQELRELKKSKEKHDEEMDLMKQNQDKLVSELSFMRKVLNKYFPKELSMAQNFGSSFGQVHDTNSGFEQAHYVEKKIPTPQGNMFKPSGSIKPEGLDEGDGRWHYNSDNLESSTYAAGLALEALAGVISLASSETDIKYDEINGIMKDFDELDHLASTGLHLGDTKCMVIQEEPEAIICEKKNVDPKTEKRKKSTASVDDITSLLKLVRKDNDDAVRKLAAEALASLATDVFLVSYQQCREGQDVLPEQIKAVLLDSAGFHGMLDKCFPLTEEPTIVAVACSL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03521 616 Gene3D Dynein light chain 2a, cytoplasmic 437 531 - -
Pumo3g03521 616 SUPERFAMILY Profilin (actin-binding protein) 441 516 IPR036140 -
Pumo3g03521 616 Pfam Profilin 453 515 IPR005455 GO:0003779
Pumo3g03521 616 PRINTS Profilin signature 492 506 IPR005455 GO:0003779
Pumo3g03521 616 PRINTS Profilin signature 468 488 IPR005455 GO:0003779
Pumo3g03521 616 PANTHER OS10G0409366 PROTEIN-RELATED 12 323 - -
Pumo3g03521 616 Coils Coil 323 364 - -
Pumo3g03521 616 Pfam Plant transposase (Ptta/En/Spm family) 180 310 IPR004252 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03521 Pumo-Chr3 73008313 73012301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03521 430 524 Cytoskeleton Gene Families AT4G29340 37.374 2.02e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03521 - - gmx:100795315 525.398