Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03495 ATGCATGATATGGACATTCCACTCCCTGAAGAACTCGAATTTCTCGAATCAAATTCTCACTTCCAAGATCAAGAACAAGAACAAGGAGAAGAAGAAGATTACCACTATTACTTCCCAGACCTTAACCCCGCCGCGGAACCACAATCTCCAGAACCGCCGCCAGATCTTGCGGTTCCGATTGAGTCCGAATCCAACGGCCACAAGCGATCGCGATCGCGTCCGCCTTCTCCTCCCGAAGAGGAGAAGAGAGCGAAGGTTAGGGTTGCCGTCGAGGAGGATTCTTCCGCGGTCGCCGACGAGGAGGATTCTTCCGCGGTCGCCGACGAGGACTGGCTCCGGTACTCTCCGCCGCCGGCGGTGGAGGAAATAACGTTCGAGAAGGAGAAGACGCTGTCGAGGTTCGCCTCGGAGATCGACGGCGAGTGCATGCCGATCACCGCGCCTAATGGAAACAGGGTTTACGCGAAGCTGAACCGGTTCCAGGGAGAGGAGCGCCTCACGAAGCTTGATTACAATGGATATTCTGATGAGCTTAGTTCAGAACCAGTTAATGTTATACTTGAGAGGTTGGAGCAAGAGGCTTTTGCTAAGGCCTTGGAAGCTAGTTCTGAAGGCCAAAGTGTTCTAGACGTTCCTGAAGCACAAATGGTTCATGAGCGACTTTGGGTTGATAAATATGCTCCGAAATCATTTACCGAGCTTCTCAGTGATGAACAGACAAATCGTGAGGTACTCTTGTGGTTGAAACAATGGGATTCTATTGTGTTTGGATCTGAAATTCGAAGCACATCAGATGACGTTTTGTCTGCTTTGAAAAGACATTCTTCTATTGTCCACAATCAGAAACCATTGAATTCAAAGTTTCCAAGGATGAACGGAGGACCCAAATGGAGTAATGGGAAGAGGTATACAAATTCTAGAAGTATGGATGAGAGTGGTAGTTCAAAGAGTATTCAAGATGTATGGAATACAAAGTCAAGGAATATTGGTCCTCCAGAACAAAAGATCCTTCTGCTCTGTGGACCACCAGGTCTTGGAAAAACAACACTTGCACATGTAGCTGCTAGGCACTGTGGATATCATGTGGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACAATTGAAGCCAAAATCCTTGATGTGGTCCAGATGAACTCTGTCTTGTCTGATTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGATGGCAAGGGTGCTGTGGAGGTTCTTTTAAAGATGATTTCTGCTGAAAAGAAGCCTGATGCAGGGAAACAAAGTTTGGGCAAAGGACAACAGGAAAGGAAGTCATCAAAAAAGGGTTCGAAAACAGCTTCACTTTCAAGACCTGTGATTTGTATTTGTAATGACCTATATGCACCTGCCTTAAGACCATTACGTCAGGTAGCCAAGGTTCATATATTTGTTCAACCAACAGTTAGTCGTGTGGTAAACAGGCTGACATATATATGTAACAAGGAGGGGATGAAAGCCAGTGCAATTGCACTCACTGCTCTAGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCCAAGAAGAAAGAGGCCCTCAATGTGTTTGATATTGGTTCTCAAGTTGTTGGCCAGAAGGACATGTCAAAGAATGTTCTAGACATCTGGAAAGAGATTTTCCATAAGAGAAGAACAAAAAAGATGGAAAGAAAATCTCATAGAGGCAAGTCCTTTGAATTTGACTCCATGTACTCCCTTGTGTCAAACCGTTCTGATAGTGACTTGATTCTGGATGGAATTCATGAAAATGTTTTGCAGCTCAATTATCATGACCCTGTGATGCAGAAAACTGTCAAGTGCTTCAACAATCTTGGAGTTTATGATCTAATGCATCAATATATAATGCATACACAACAGATGCCCCTTTATGTATATTTGCCCCTAGTGGCAATTACTGTACATCATATAGTATCTCAAGTTCAGAAACCAAACATTGAGTGGCCAAAGTCACATCAGAGATGTCGTACAATGATGATGGAAAAGAAGGACATTTTGAATACTTGGCACCACAAAATCCCACCGCATATTGCAAGGCACTTATCAGCTAGTTCCTTTGTTGAAGACTTAATTTCTCCGTTATTACATATTCTGTCCCCACCAACTATAAGACCGGTGGCATTGCAACTACTATCAGAGAAGGAGAAGAATGATCTTGCTCAATTAGTTAGCACAATGGTATCATACACTATAACATATAAGACTGTGAAATCAGATATGCTGCCTCAAACCCTGAAGTGTGAAGTAGCAGATGGCTTGGCACTGTCTCTTGTTCCTCCTATCAGTGACTTTATAAACTTCAAGGATTATACTTCAAGCCATTATGTGCTTTCTGTAGCTATGAAGCAGGTTTTGGTACATGAGGTTGAAAAGCATAAGATTTTACAAGTTAGTGTTGACAAAGCTGTGGCTTTAGCAAATGGAGGGCATGAAGTTATTGAGACTGGAACTAACAACATCGCATTAGCCAATCCCAATCATGTAACTGCAGTTGATATGAAAACTAATGAAAATCAGGCTAATGTTTTAGCAAGGCAATTAAATGCAAATCCCACAACAGTTTCACCAAACTTGAATTCCGATAAAAGTTCAAGTGCAACAGACAGTGGGAAGCTACTAAACATGGGAAATATGAAAAAACCATCCAGAAGTTCCTCAAGTTTCTTTGACAGGTTTAAAAAAGTAAATGTTAAGGGTTTACAAAGTAATGACAGATATCTACGGGAAGAAGCTACCATGGAGAAAGAACGATACCCTTTACTTTTTAAATTTAACGAGGGCTTTACTAATGCAGTCAAAAGGCCTGTTCGTATTCGTGAATTCCTATCCTAA 2901 0.4233 MHDMDIPLPEELEFLESNSHFQDQEQEQGEEEDYHYYFPDLNPAAEPQSPEPPPDLAVPIESESNGHKRSRSRPPSPPEEEKRAKVRVAVEEDSSAVADEEDSSAVADEDWLRYSPPPAVEEITFEKEKTLSRFASEIDGECMPITAPNGNRVYAKLNRFQGEERLTKLDYNGYSDELSSEPVNVILERLEQEAFAKALEASSEGQSVLDVPEAQMVHERLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSIVFGSEIRSTSDDVLSALKRHSSIVHNQKPLNSKFPRMNGGPKWSNGKRYTNSRSMDESGSSKSIQDVWNTKSRNIGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISAEKKPDAGKQSLGKGQQERKSSKKGSKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVNRLTYICNKEGMKASAIALTALAEYTECDIRSCLNTLQFLSKKKEALNVFDIGSQVVGQKDMSKNVLDIWKEIFHKRRTKKMERKSHRGKSFEFDSMYSLVSNRSDSDLILDGIHENVLQLNYHDPVMQKTVKCFNNLGVYDLMHQYIMHTQQMPLYVYLPLVAITVHHIVSQVQKPNIEWPKSHQRCRTMMMEKKDILNTWHHKIPPHIARHLSASSFVEDLISPLLHILSPPTIRPVALQLLSEKEKNDLAQLVSTMVSYTITYKTVKSDMLPQTLKCEVADGLALSLVPPISDFINFKDYTSSHYVLSVAMKQVLVHEVEKHKILQVSVDKAVALANGGHEVIETGTNNIALANPNHVTAVDMKTNENQANVLARQLNANPTTVSPNLNSDKSSSATDSGKLLNMGNMKKPSRSSSSFFDRFKKVNVKGLQSNDRYLREEATMEKERYPLLFKFNEGFTNAVKRPVRIREFLS 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03495 966 Pfam ATPase family associated with various cellular activities (AAA) 337 463 IPR003959 GO:0005524|GO:0016887
Pumo3g03495 966 CDD AAA 332 422 - -
Pumo3g03495 966 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 965 - -
Pumo3g03495 966 CDD HLD_clamp_RFC 484 542 - -
Pumo3g03495 966 Gene3D - 484 554 - -
Pumo3g03495 966 Gene3D - 219 482 IPR027417 -
Pumo3g03495 966 MobiDBLite consensus disorder prediction 428 449 - -
Pumo3g03495 966 MobiDBLite consensus disorder prediction 1 108 - -
Pumo3g03495 966 SMART AAA_5 333 487 IPR003593 GO:0016887
Pumo3g03495 966 FunFam Chromosome transmission fidelity protein 18 484 551 - -
Pumo3g03495 966 MobiDBLite consensus disorder prediction 873 908 - -
Pumo3g03495 966 MobiDBLite consensus disorder prediction 62 94 - -
Pumo3g03495 966 MobiDBLite consensus disorder prediction 283 319 - -
Pumo3g03495 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 532 IPR027417 -
Pumo3g03495 966 MobiDBLite consensus disorder prediction 16 37 - -
Pumo3g03495 966 MobiDBLite consensus disorder prediction 298 319 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03495 334 614 Core DNA Replication Machinery Family AT5G22010 27.946 2.14e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03495 K11269 - gmx:100785041 1677.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03495 3 70118041 70142190 Pumo3g03495 3 70118041 70142190 ECH