Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03493 ATGGCTCTGGAAGTTGTTGCTGGACCTTTAATGGGAGCTGTATTCAACGTGTTGCTTGAAAAGATTGCTTCCGCTGAGGTTGTCAACTTCTTCAAGAAGAAAAACTGTGACAAGTTGCTCAAAAGGTTGAAGATCATCTTGTTGTCTGTCAATGCTGTGCTCAATGATGCTGAGGAAAAGCAAATGAAAAATGAAGCAGTGAAGGAGTGGCTTGAGGAACTCAAAGATGTGGCCTTTGCTGCTGAGGACTTACTTGATGAGATCTACACTTGTGCAAAAATCAAGGCAGAAGAGGTAAACACACTCCACTCCACTCCTATGACTTTTTATGATAAAGGGGTTGAAGAGAAAATTGAAGATGTTCATGAGAGATTAGAGTTTATTATAAGGCAGAAAGAAGTGCTTGATCTCAAGGTGGGTAAGGAAGTCAAAATGGCACACAAAACTCCAACCTCATCTGTGATGGAAGCATGTGATGTCTATGGAAGGGATAGTGAAAAAGAAACCTTAGTGAACTTGGTGTTGTCACATGATGAAAAAATAGGTGTCATTCCTATTGTTGGAATGAGTGGAATTGGAAAAACTACCTTAGCTCAATTGATATACAATGATCAGAGAGTGCAGAAGGAGTTTGATCTCAAGGCCTGGATTTATGTCTCTGAAGAATTTGACATTTGTAAGATTACAAAAACCCTTTTGGAGGCTGTCACATCTCGAAGTTGTGATATTGAAGATCTAAATTTTCTTCAGAGGGATCTCAAAATGTACATAATGAAGAAAAAGTTTTTGTTTGTGTTGGATGACGTGTGGAATGAAAATTATGATTATTGGGACAAATTCAGGAGTCCATTTAAGCATGCTGGGGCTCATGGAAGTAAGATCATTGTAACTACTCGAAGCAGGAATGTTGCATCCATCATGCAGACTATTTCACCTTATAATCTCAGTGAGTTGTCCAATGAAGATTCCTGGAATTTATTTTCAAAACATGCATTTGACTATGGCGATTCAAGTTTGCATCAAAGTCTAGACAAAGTGGGGAGAGAAATAGTTAGAAAGTGCAAAGGGTTGCCTTTGGCCGTGAAGACACTTGCAGGACTTTTGAGGTCTAAAAGTGATAGGCAAGAATGGTGTAAAGTATTGAACAGTGAGATATGGGATCTTCAAGATTCTGAGAGTAACATTCTTCCAGCTTTGAGATTGAGCTACCATTATCTCCCTTCCCATTTGAAGAGATGTTTTGCTTATTGTGCAATTTTCCCAAAAGATTATGAATTTGAAAAGGAGAGCCTGGTTTTGTTGTGGATGGCAGAGGGTTTTCTCCAACAATCAAAAAGACATAGAAGAATTGAAGAAGTTGGAAATGAGTATTTTTGTGAACTAGTATCTAGATCATTTTTCCAGCCATCAAGGCGCGACAAGTCGTGTTTTTTAATGCATCACCTTGTAAATGACTTGGCTCAATTTGTATCAGGAACATTTTCTGTCAGAATGGAAGGTAACAATTCTAATGAAATCAAAGAAAGAACTCGCCATTTGTCCCACATTATTGCAGATAGTTCCTCATATGTAAAGCTGAAAGATGCTGACAAAGCAAATTGCCTACGCACTTTTCTGCAAATAAGACCAATAGGTACATCCATTGACTTGTTCGACAACATGCCAAATGATCTGTTAACAAAGTTAAGGTGCTTAAGGGTGTTATCTTTGGTAGGTTCACATATCTATGGTTTACCCAATTCAATAGGTGAACTAAAACATCTGCGCTATCTAGAAGTGGCTGACACTGAGATTATGAAGTTACCTGAATCCATCTGCAGCTTGTACAATTTACAAACTCTCAAGTTAGTTGGATGTCACAAGCTTATTGAACTGCCAACAGGTATTCATAAGCTTGTTAACTTGCGCTACTTGGATATTAGAGGAACTTGTTTAAGGTGGATGCCATTGCAAATGAATGAATTAACAGGCCTCCAAAATTTGAGTGACTTTTTTGTGGGAAAGGAGAATGGATCTTCCATCGGTGAATTGGGCGAGCTATCAGGTTTACATGGGGAATTGTTCATTCATTACATTGAACATATTGTTAATGATAAGGATTGTGAAAAGGCAAAGTTGAAGGAAAAGCATGGTCTTGAAAAGTTGTCTTTGGATTGGTGTGGGAATGGTGAAACTGATGACTCTCAAAAAGAAAAAATCATACTGAACAGCCTGCAACCACATACAAATTTGAAGGAGCTTGATATCTATGACTATCCAGGCACAGAATTTCCAGATTGGTTGGGGGATAACTCCTTTTACAACTTGGTGTCTTTACAGCTTAAGGGCTGTAAATATTGCTACAACTTCCCTCCTCTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATTAGTAAATTTGAGGGACTAGTGAGTGTGGGATCTGAGTTTCTTGGGAATAGAACCTCTTCTGTAACTGATTGCTTTCCTGCACTAGAAATTCTAAGGATTGAGCATATGTCAGCATGGGAGAAATGGTATCCTGATGCTGAAAATGCAGGCAGCAAAGCTTTCTGCCAACTTAGAGAGTTTCATATTGAAAACTGTCCCAAACTGAGAGGGGATTTACCAGGCAACCTTCCATCTTTGACATTACTTGTAATCAGAGATTGTAAACGTTTGCTTTGTTCTCTTCCTAAAGCTCCGGCTCTGCGTGTGTTGAACATTCAGAATTGTGAGAGTCTAGAATTCCCAGTACATGCACCTTCGTGCCACCAATCGCTGACATCATTGTTCTTGCATGGTAGCTGTGACTCACTCATGTTCTTGCCTTTAGATCTCTTCCCCTACCTCAAGTCTCTAGATATTTGGGGATGTAAAAATCTTGAAGCACTTACTGCTTCAGCTTCAGATGCCACCCCTCCAAATTTCAAGTCCCTCCATTCCTTGTGTATAAGGCATTGTCCAAAGTTCACATCATTTCCCCAGGGTGGATTTTCAGCACCAAAGCTCACTTTGTTAACCATCAACTACTGTGAAAAGTTGAATTCTCTGCCTGAACAAATGCATGACCTTATGCCAAGCTTGAAAGAAGTTCAACTAAGGGGTTGTCCCAAAATTGAGTCATCAACTATGAGGCCACTCAGGATCCGGATTTGCAGCAAACTCATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCAAGGTTAGGGGGTTTGGTCACTGTTCAAAGTCCCTCATCAAGCTAG 3231 0.3965 MALEVVAGPLMGAVFNVLLEKIASAEVVNFFKKKNCDKLLKRLKIILLSVNAVLNDAEEKQMKNEAVKEWLEELKDVAFAAEDLLDEIYTCAKIKAEEVNTLHSTPMTFYDKGVEEKIEDVHERLEFIIRQKEVLDLKVGKEVKMAHKTPTSSVMEACDVYGRDSEKETLVNLVLSHDEKIGVIPIVGMSGIGKTTLAQLIYNDQRVQKEFDLKAWIYVSEEFDICKITKTLLEAVTSRSCDIEDLNFLQRDLKMYIMKKKFLFVLDDVWNENYDYWDKFRSPFKHAGAHGSKIIVTTRSRNVASIMQTISPYNLSELSNEDSWNLFSKHAFDYGDSSLHQSLDKVGREIVRKCKGLPLAVKTLAGLLRSKSDRQEWCKVLNSEIWDLQDSESNILPALRLSYHYLPSHLKRCFAYCAIFPKDYEFEKESLVLLWMAEGFLQQSKRHRRIEEVGNEYFCELVSRSFFQPSRRDKSCFLMHHLVNDLAQFVSGTFSVRMEGNNSNEIKERTRHLSHIIADSSSYVKLKDADKANCLRTFLQIRPIGTSIDLFDNMPNDLLTKLRCLRVLSLVGSHIYGLPNSIGELKHLRYLEVADTEIMKLPESICSLYNLQTLKLVGCHKLIELPTGIHKLVNLRYLDIRGTCLRWMPLQMNELTGLQNLSDFFVGKENGSSIGELGELSGLHGELFIHYIEHIVNDKDCEKAKLKEKHGLEKLSLDWCGNGETDDSQKEKIILNSLQPHTNLKELDIYDYPGTEFPDWLGDNSFYNLVSLQLKGCKYCYNFPPLGQLPMLKELQISKFEGLVSVGSEFLGNRTSSVTDCFPALEILRIEHMSAWEKWYPDAENAGSKAFCQLREFHIENCPKLRGDLPGNLPSLTLLVIRDCKRLLCSLPKAPALRVLNIQNCESLEFPVHAPSCHQSLTSLFLHGSCDSLMFLPLDLFPYLKSLDIWGCKNLEALTASASDATPPNFKSLHSLCIRHCPKFTSFPQGGFSAPKLTLLTINYCEKLNSLPEQMHDLMPSLKEVQLRGCPKIESSTMRPLRIRICSKLMEGKQNHSDPLFARLGGLVTVQSPSSS 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03493 1076 Gene3D Ribonuclease Inhibitor 495 690 IPR032675 -
Pumo3g03493 1076 PRINTS Disease resistance protein signature 256 270 - -
Pumo3g03493 1076 PRINTS Disease resistance protein signature 871 887 - -
Pumo3g03493 1076 PRINTS Disease resistance protein signature 354 368 - -
Pumo3g03493 1076 PRINTS Disease resistance protein signature 183 198 - -
Pumo3g03493 1076 FunFam Probable disease resistance protein At5g66910 317 402 - -
Pumo3g03493 1076 Gene3D - 317 401 IPR042197 -
Pumo3g03493 1076 Gene3D - 141 311 IPR027417 -
Pumo3g03493 1076 FunFam Probable disease resistance protein At1g61300 143 311 - -
Pumo3g03493 1076 Coils Coil 40 60 - -
Pumo3g03493 1076 Gene3D Ribonuclease Inhibitor 703 868 IPR032675 -
Pumo3g03493 1076 Gene3D Ribonuclease Inhibitor 966 1049 IPR032675 -
Pumo3g03493 1076 Gene3D Ribonuclease Inhibitor 869 965 IPR032675 -
Pumo3g03493 1076 Pfam Rx N-terminal domain 11 93 IPR041118 -
Pumo3g03493 1076 Gene3D - 402 489 IPR036388 -
Pumo3g03493 1076 Gene3D - 14 127 - -
Pumo3g03493 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 417 IPR027417 -
Pumo3g03493 1076 FunFam Probable disease resistance protein At1g63360 403 489 - -
Pumo3g03493 1076 SUPERFAMILY RNI-like 821 1036 - -
Pumo3g03493 1076 SUPERFAMILY L domain-like 479 886 - -
Pumo3g03493 1076 PANTHER DISEASE RESISTANCE PROTEIN RP 40 909 IPR044974 GO:0006952
Pumo3g03493 1076 Pfam NB-ARC domain 174 403 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03493 Pumo-Chr3 70098265 70103315 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03493 155 646 WRKY Transcription Factor Family AT5G45050 23.136 1.04e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03493 - - vum:124831962 1905.57