Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03491 ATGCGTGAAAATCGGAATTCGCACGGGTATCTTACTATTGGTCATGAAAGTATCACTTTAAAGGGATTGCAATTCAAATTGATTACAATTAAAGCAGCAACAAATAATTTCTCACACAAGAATAAGATTGGCATAGGTGGATTCGGAGAAGTTTACAAGGGTATTCTTTGTGATGGACGACGTATAGCTGTCAAGAGGCTTTCAACAAGTTCTAAGCAAGGTTCAATTGAGTTCAAGAATGAGATTTTATTAATAGCAAAGCTACAACATAGAAATATTGTGGCGCTTATAGGTTTTTGCCTAGAAGATCAAGAGAAAATTCTTATTTATGAATACATGCCAAATGGGAGCCTTGATTACCTTTTATTTGATAATCAACAACAAAATTTAAGTTGGTTGGAGCATTACAAAATTATACGAGGGACTGCTATGGGAATTCTTTATTTACATGAATATTCTCGACTTAAAATGATACACCGTGATCTTAAACCTAGTAATGTTCTATTAGATGAAAATATGAATCCTAAAATACCAGATTTTGGCATGGCTAAAATTGTTGAAATGGATCAAGATCGTGAAAATACTAATAGAATTGCAGGAACATATGGTTATATGTCACCAGAATATGCAATGCTTGGACAATTTTATGAAAAGTCAGATGTTTTTAGTTTTGGTGTCATGGTTCTTGAGATTATAACTGGAAAAAGGAATGTAAATGTTTATGGATCACACAATGTTGTGGAAGGCCTAATGGATTATTGTCCCTTGAAGGGGCCAAGGGCCAAAGAGAAGATGGTGGAGTTCATGGAGAAGGTCTTTGCCATCGTGGAGAACGAGGAACTCACTGTGGGGGAGCTCAACCTCTTTTCTGTTGCCTACAAGAACATCATCAATGTCGCAGAGATCCTTGATGACGATGATGTTCTTGAATTCGAAGCCTCTAACTGCCCTCCTTCGCCACCCCCACCTTCTTGA 975 0.3703 MRENRNSHGYLTIGHESITLKGLQFKLITIKAATNNFSHKNKIGIGGFGEVYKGILCDGRRIAVKRLSTSSKQGSIEFKNEILLIAKLQHRNIVALIGFCLEDQEKILIYEYMPNGSLDYLLFDNQQQNLSWLEHYKIIRGTAMGILYLHEYSRLKMIHRDLKPSNVLLDENMNPKIPDFGMAKIVEMDQDRENTNRIAGTYGYMSPEYAMLGQFYEKSDVFSFGVMVLEIITGKRNVNVYGSHNVVEGLMDYCPLKGPRAKEKMVEFMEKVFAIVENEELTVGELNLFSVAYKNIINVAEILDDDDVLEFEASNCPPSPPPPS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03491 324 Gene3D Phosphorylase Kinase; domain 1 4 112 - -
Pumo3g03491 324 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Pumo3g03491 324 SUPERFAMILY Protein kinase-like (PK-like) 21 257 IPR011009 -
Pumo3g03491 324 Pfam Protein tyrosine and serine/threonine kinase 39 274 IPR001245 GO:0004672|GO:0006468
Pumo3g03491 324 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 1 112 - -
Pumo3g03491 324 SUPERFAMILY 14-3-3 protein 263 299 IPR036815 -
Pumo3g03491 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pumo3g03491 324 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 240 - -
Pumo3g03491 324 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03491 324 FunFam Lectin-domain containing receptor kinase A4.3 113 284 - -
Pumo3g03491 324 Gene3D Transferase(Phosphotransferase) domain 1 113 288 - -
Pumo3g03491 324 ProSiteProfiles Protein kinase domain profile. 37 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03491 Pumo-Chr3 70054218 70070180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03491 16 247 Receptor kinase-like Gene Family AT4G23230 61.441 5.79e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo3g03491 PK_Tyr_Ser-Thr 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03491 - - gmx:100785282 415.231