Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03471 ATGAATAGATATCCGCAAAAACTGAGTGATACTTGGACTTGGTCGCAGACTCAATACTTCTCTTCCAGCGAGTCGACTCGGTCACATGATAGGGTTTTCCCAATGTTCCTAGAGGAAGAGGGGGAGGACTTGTGGGAGAAAGTTGCTAAGGAGATCATGGAAAGGTATCACCAAGCATTGTTTCATGACACGGTCCATATCGAATCGACCCGAGTCAATTTTCCGGCTGACTTGGATGACTCGCCGTCATCGGTGGAGGATACTGGTTCATCGAAGTCTGTTAGGAGAAGAAAAGGGAAATCCTGGAAGCCCTGGACTGAAGAAGAACACAGGTTATTTCTTCTTGGACTCAAAATATATGGCAAAGGAGATTGGAAAAGTATTTCAACACATTGTGTCAAGTCAAGAACTCATATTCAAGTAGCTAGTCATGCCCAAAAACATTTCCTTCATGAGAAAGTTTCAAACAAAGAGAGTAAAAGAAAAAGCATTTATGACATAACATTACAGAACAAACGTCGTATGGTTCCTCACCACATTAATCTACAAAACGTGGCACCTCCTCCAGAAATGCAGCAATTGCAAGCACAGCACCAAGCACATGGAATATTGCAGATGAATACACAAGATGACTTTGCAGTTGAATTTGAAATTTCAGTTGAAGATCCCTCTGTAATTGATGTTGAAATAGTTCACATTGAGCATACCAAGCTACGTGGAGTTAGGAAAGTAGACCTTGGGAAAATAGATTTGGTTCACCGTGGAAGGTATGTCATAAACTTCTAA 786 0.4135 MNRYPQKLSDTWTWSQTQYFSSSESTRSHDRVFPMFLEEEGEDLWEKVAKEIMERYHQALFHDTVHIESTRVNFPADLDDSPSSVEDTGSSKSVRRRKGKSWKPWTEEEHRLFLLGLKIYGKGDWKSISTHCVKSRTHIQVASHAQKHFLHEKVSNKESKRKSIYDITLQNKRRMVPHHINLQNVAPPPEMQQLQAQHQAHGILQMNTQDDFAVEFEISVEDPSVIDVEIVHIEHTKLRGVRKVDLGKIDLVHRGRYVINF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03471 261 Pfam Myb-like DNA-binding domain 104 148 IPR001005 -
Pumo3g03471 261 MobiDBLite consensus disorder prediction 76 99 - -
Pumo3g03471 261 SUPERFAMILY Homeodomain-like 100 152 IPR009057 -
Pumo3g03471 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 153 IPR017930 -
Pumo3g03471 261 PANTHER TRANSCRIPTION FACTOR KUA1 21 197 - -
Pumo3g03471 261 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Pumo3g03471 261 FunFam transcription factor MYB1R1 103 154 - -
Pumo3g03471 261 SMART sant 101 151 IPR001005 -
Pumo3g03471 261 CDD SANT 104 149 IPR001005 -
Pumo3g03471 261 Gene3D - 105 153 - -
Pumo3g03471 261 NCBIfam myb-like DNA-binding domain, SHAQKYF class 103 151 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03471 Pumo-Chr3 69053042 69056604 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo3g03471 Myb_DNA-binding 1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03471 - - gmx:100776492 359.762