Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03457 ATGGGTTTGACAAAACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAATTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTACCGATCTACCTTAAACCAACTTTTCCAAGGAATTGAAGGTGACGGGGATTCTTCACAGCTAGCATCTGTGACAATGCGAATATTGCAAGCTCTTCAAACCAATTTAGATGGGAAATCAAAGCAATATAGAGACCCTGCTTTGACACATCTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGGAGGTCTGAAGCAAAAGATTTGTTGGGGGACGATTGGATACAACGGCATAGGAAGATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTCCCTATCTATTCAAGGCCTCATCTCATCAAGTGGTGGGGGTAGTACTGCTGGTAGCGATGCGGGAAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAATGGACAGTACCAGACACAGAGTTGCGAGAGTCTCTTATTCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTAAAGCGTTTCGGGCCTCTGGTGGAGAATGTAAAGAGTACTCAGAGGTACATCAAATACACTGCTGAAGATCTAGAGCGAATCTTAGGTGAATTTTTTGAAGGTAAAAACATGAATGATAACAAGCGGTAA 828 0.4058 MGLTKQLAQTAQETFGDFEEAVEKDATKTAVIDGTVHPLTSYVINYVKFLFDYRSTLNQLFQGIEGDGDSSQLASVTMRILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSSGGGSTAGSDAGSSGASRAIVKDRFKTFNTMFEELHQKQSQWTVPDTELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSTQRYIKYTAEDLERILGEFFEGKNMNDNKR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03457 275 Pfam Exo70 exocyst complex subunit 3 262 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo3g03457 275 Gene3D Exocyst complex component Exo70 1 275 - -
Pumo3g03457 275 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 267 IPR004140 GO:0000145|GO:0006887
Pumo3g03457 275 SUPERFAMILY Cullin repeat-like 2 266 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03457 Pumo-Chr3 68404057 68408216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03457 2 275 EXO70 exocyst subunit family AT5G03540 78.182 2.17e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03457 K07195 - gmx:100775958 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03457 3 68404057 68408216 Pumo3g03457 3 68404057 68408216 ECH
Pumo5g02984 5 77782566 77784552 Pumo3g03457 3 68404057 68408216 PCT