Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03456 ATGGGAATGGCTGTGGCGAGTGATGATTTGCTGAGTGAGAAAGCTGCGGCGATGAGAGCGTCTCTGGAGAGAAGCCAGACCATCACAGACGACGTCGTTTCGATTCTGGGCTCCTTCGATCACCGCCTCTCCGCCCTCGAAACCGCCATGCGTCCTACCCAGATCAGAACGCATTCTATTCGGAAAGCTCATGAGAACATTGACAGGACTTTGAAGACTGCAGAGGCCATATTGGCTCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAGTTAAAGGACCACATGAAGATGTGAAGAACTATCTTGAAGCAATTGATCAGCTGAGAAGAAACATTAGATTTTTTGGTAATAAGAAGGGTTTTAAGAATGATGATGGTATTGTCATCCGTGCCAATAATTTGATAAGCGAAGCTATTTCTAAGCTAGAAGATGAGTTTAAGCGGCTATTATCATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGGTTCTCTTCCAAACACAATGCGACCTTCATCAGCATCACCAGGTCGTGATGGTGATCCTAATGGCAAGAATCATTCTGAGCCACATAAAAATAATACTGATGCTGTTCTATACACACCTCCTGTTCTTATACCACCAAGAATTTTGCCACTGCTCAATAATTTAACCCAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAATATACAGGTAG 714 0.4356 MGMAVASDDLLSEKAAAMRASLERSQTITDDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKTAEAILAHFDQYYQAEAKIVKGPHEDVKNYLEAIDQLRRNIRFFGNKKGFKNDDGIVIRANNLISEAISKLEDEFKRLLSSYSKPVEPERLFGSLPNTMRPSSASPGRDGDPNGKNHSEPHKNNTDAVLYTPPVLIPPRILPLLNNLTQQMVQAGHQQQLLKIYR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03456 237 Coils Coil 99 119 - -
Pumo3g03456 237 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 236 IPR004140 GO:0000145|GO:0006887
Pumo3g03456 237 SUPERFAMILY Cullin repeat-like 77 236 IPR016159 -
Pumo3g03456 237 Gene3D Exocyst complex component Exo70 75 237 - -
Pumo3g03456 237 MobiDBLite consensus disorder prediction 162 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03456 Pumo-Chr3 68391077 68394430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03456 1 237 EXO70 exocyst subunit family AT5G52340 60.759 7.61e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03456 K07195 - gmx:100775958 432.565