LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo3g03437	ATGATCTCTCTAAGTTTGTGGCATCTCCTCCACATACTTACATGTATTCTTCTTTTGACTCACACCTATTCTGATGAGGATGAGCGAAAGACCTACATTGTCTACATGGGTGAACATCACAAGGGCGTCCAATCCTCAGAATTACTTCACATTAGTATGGTTCAAAGTATACTTGGCAGCAAATTCGCACCAGATGCCTTGCTACATAGCTACAAGAAGAGTTTTAATGGATTTGTTGTAAAGCTAACAAAAGAGGAAGCAGTGAGAATGGCAGGATTGGATGGTGTGGTTTCCATTTTCCCAAACAAAAAGAATAAACTACATACAACAAGGTCTTGGGACTTCATAGGCTTCTCTCAAAATGCCAGAAGAACAAGTGTAGAGAGCGACGTAATTGTTGGAATAATAGATACTGGAATTTGGCCTGAGTCTAATAGTTTTAATGACGAAGGATTTGGTCCACCACCACAAAAATGGAAGGGCACTTGCCATAACTTTACCTGCAACAAATCATGCCTACAAAATTCTTTGGATGAGGATTTGGTGAAGGGAAAGATTGTTTTGTGTGATGGTTTTCGAGGTTCTTCATCTGTGGGATTGGTTTCTGGAGCAGCTGGTATTTTACTAAGAAGTTTAGGGTCAAAAGATGTTGCATATACATTTGCATTGCCAGCAGTTCACCTTAGCTCAAAAGATGGGGCACTCATACAGTCTTACATAAATTCAACAAGTAATCCGACAGCCATTATATTTAAGAGTAATGAAGGCAAAGACTTATTAGCCCCTTCCATAGCTTCATTCTCATCTAGAGGTCCAAATGCAATCACTCCAAATATTCTTAAGCCTGATTTAGCTGCTCCAGGAGTTGACATTTTAGCTGCATGTTCTCCAATTAGACCTGTTTCTGGGGTCAAAGGTGATGAGAGAAAAGCAAACTATAATATACAATCTGGCACATCAATGGCATGCCCTCATGTTGCTGCAGCAGCTGCCTATATCAAATCATTTCATCCTGATTGGTCTCCTTCGGCAATCAAATCAGCATTAATGACTACTGGTAATGAGTCTACACCAATGAGTGCTGCACTTAATCCTGAAGCTGAATTTGCTTATGGTGCTGGACAAATCAACCCCATCAAAGCAGTGAATCCTGGCTTAGTATATGATGCCAGTGAAATTGATTATGTCAAGTTTCTATGTGGACAAGGTTATGATACTAAAAAGCTACGGAGTATTACAGCTGATAATAGCAGTTGTACACAAGCCAATAATGGAACAATTTGGGATCTAAATCTCCCATCTTTTGCGCTCTCCATGAACACCTCGACATTTTTTAGTGGTGTTTTTCGTAGAACTGTAACCAATGTTGGATCTGCTACATCAAAATATAAAGCTAGAGTAATTGCACCTCCATCTTTGTTAAACATTAAAGTGGAGCCAGAAGTTTTGTCCTTCTCATTTCTGGGTGAAAAGAAGTCTTTCACTCTTCGGATTGAAGGGAGAATTAATGTGGGTATAGTTTCTTCTTCATTGGTTTGGGATGATGGCACTTTACAAGTAAGGAGTCCTATTGTTGTGTATTCTGAATAA	1590	0.3937	MISLSLWHLLHILTCILLLTHTYSDEDERKTYIVYMGEHHKGVQSSELLHISMVQSILGSKFAPDALLHSYKKSFNGFVVKLTKEEAVRMAGLDGVVSIFPNKKNKLHTTRSWDFIGFSQNARRTSVESDVIVGIIDTGIWPESNSFNDEGFGPPPQKWKGTCHNFTCNKSCLQNSLDEDLVKGKIVLCDGFRGSSSVGLVSGAAGILLRSLGSKDVAYTFALPAVHLSSKDGALIQSYINSTSNPTAIIFKSNEGKDLLAPSIASFSSRGPNAITPNILKPDLAAPGVDILAACSPIRPVSGVKGDERKANYNIQSGTSMACPHVAAAAAYIKSFHPDWSPSAIKSALMTTGNESTPMSAALNPEAEFAYGAGQINPIKAVNPGLVYDASEIDYVKFLCGQGYDTKKLRSITADNSSCTQANNGTIWDLNLPSFALSMNTSTFFSGVFRRTVTNVGSATSKYKARVIAPPSLLNIKVEPEVLSFSFLGEKKSFTLRIEGRINVGIVSSSLVWDDGTLQVRSPIVVYSE	529

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo3g03437	529	SUPERFAMILY	Subtilisin-like	5	411	IPR036852	GO:0004252\|GO:0006508
	Pumo3g03437	529	ProSitePatterns	Serine proteases, subtilase family, serine active site.	318	328	IPR023828	-
	Pumo3g03437	529	Gene3D	-	399	528	-	-
	Pumo3g03437	529	PRINTS	Subtilisin serine protease family (S8) signature	317	333	IPR015500	-
	Pumo3g03437	529	PRINTS	Subtilisin serine protease family (S8) signature	128	147	IPR015500	-
	Pumo3g03437	529	Pfam	Peptidase inhibitor I9	31	108	IPR010259	-
	Pumo3g03437	529	Pfam	Fibronectin type-III domain	429	526	IPR041469	-
	Pumo3g03437	529	Pfam	Subtilase family	261	374	IPR000209	GO:0006508\|GO:0008236
	Pumo3g03437	529	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	19	108	IPR037045	-
	Pumo3g03437	529	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	382	-	-
	Pumo3g03437	529	Gene3D	-	169	257	-	-
	Pumo3g03437	529	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	171	526	IPR045051	-
	Pumo3g03437	529	Gene3D	Peptidase S8/S53 domain	130	168	IPR036852	GO:0004252\|GO:0006508
	Pumo3g03437	529	Gene3D	Peptidase S8/S53 domain	258	395	IPR036852	GO:0004252\|GO:0006508
	Pumo3g03437	529	FunFam	Subtilisin-like protease SBT5.3	20	108	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo3g03437	Pumo-Chr3	67770833	67776383	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo3g03437	113	528	Subtilisin-like Serine Gene Family	AT3G46850	44.366	2.40e-97	309

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo3g03437	-		-	gmx:100801111	623.624