Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03423 ATGGTGAAGGAAACAATGACATGCAATGAGAAAGCTGAAGGGTGTTTGATGCTGTTTGGTGTGAACATTCTTGCCAATAACCCTATAAGAGATGGTGTCCCCAAATGTTTAAGTATGGTAAACCTCAGTTATTGCCATGGAGAGGAGGAGATTAATGGCAATAAAGAAAATTCTGAAGATGGATATTTGTCTGATGTCCTTGTTCAACGACGACATGCCTTCCATGATAAGAAGAATAAGGGGAAACCATGGACTGAGAAAGAGCATATGGATTTCCTCTGTGGTTTAAAGCATCTTGGAAAAGGTAATTGGAAGGAAATCTCAAAGAACTATGTGAGAACAAAGACTCCCACCCAAGTTGCAAGTCATGCACAAAAGTATTTTCTCAGAATTGGTGCATATGAGACAAGGAAACGTAGACGAAGCCTCTTTGACATGCCACTGGAAGAGGATGGAACTTCAAAAGTTTTCAGAGTTGCCCATTAA 486 0.4012 MVKETMTCNEKAEGCLMLFGVNILANNPIRDGVPKCLSMVNLSYCHGEEEINGNKENSEDGYLSDVLVQRRHAFHDKKNKGKPWTEKEHMDFLCGLKHLGKGNWKEISKNYVRTKTPTQVASHAQKYFLRIGAYETRKRRRSLFDMPLEEDGTSKVFRVAH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03423 161 Pfam Myb-like DNA-binding domain 82 128 IPR001005 -
Pumo3g03423 161 ProSiteProfiles Myb-like domain profile. 76 128 IPR001005 -
Pumo3g03423 161 FunFam transcription factor MYB1R1 82 133 - -
Pumo3g03423 161 CDD SANT 83 128 IPR001005 -
Pumo3g03423 161 PANTHER TRANSCRIPTION FACTOR KUA1 5 150 - -
Pumo3g03423 161 SMART sant 80 130 IPR001005 -
Pumo3g03423 161 Gene3D - 82 133 - -
Pumo3g03423 161 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 132 IPR017930 -
Pumo3g03423 161 ProSiteProfiles SANT domain profile. 84 132 IPR017884 -
Pumo3g03423 161 SUPERFAMILY Homeodomain-like 78 131 IPR009057 -
Pumo3g03423 161 NCBIfam myb-like DNA-binding domain, SHAQKYF class 80 130 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03423 Pumo-Chr3 67169881 67170880 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo3g03423 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03423 - - gmx:106794827 298.13