Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03416 ATGGAAATTCACAAGGTATTAAAATTAAGTTATGATGGATTGGATCGTTCTCAGCAGGACATATTTCTAGACATTGCATGCTTCTTCAAAGGAAAAGCAAGAGATTATGTAACAAGTGAATTGGAAGCTTTTGATTTCTTTCCAGCATCTGGTATAGAAGTACTTTTAGATAAAGCTCTTATAACACTTTCATATGGCATTGTGATAGAAATGCATGACTTGATACAGGAAATGGGTCGAGAAATTGTTCACCAAGAGTCAATCAAAGACCTTGAAAGACGAAGTCGATTGTGGAGACATGAGGAAGTGCTTGATGGAACTAATGTTGTTGAGGGCATAATTTTGGATTTGGATAAAGTAAATGAGGATGTATATTTGAGCTCTGATTCCCTTGCAAGGATGACTAAACTGAGATTTCTTCAAATCAAAGGATGGTGCCCATTTAATGTGTACTTTCCTGATGGTCTCTAG 471 0.3631 MEIHKVLKLSYDGLDRSQQDIFLDIACFFKGKARDYVTSELEAFDFFPASGIEVLLDKALITLSYGIVIEMHDLIQEMGREIVHQESIKDLERRSRLWRHEEVLDGTNVVEGIILDLDKVNEDVYLSSDSLARMTKLRFLQIKGWCPFNVYFPDGL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03416 156 SUPERFAMILY "Winged helix" DNA-binding domain 2 104 IPR036390 -
Pumo3g03416 156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 154 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03416 Pumo-Chr3 66644259 66644854 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03416 6 98 WRKY Transcription Factor Family AT5G45050 50.538 2.71e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03416 - - gmx:100793798 218.779