Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03415 ATGGATGTCTATGCTGGTGTAAAGGTGCAGCACTTGGAATTCATAATGGCTGAGCAGATGATCAGTGCTGTTGCTTCTTCCTCTAACTATTCAAAAAAATATGATGTTTTTCTAAGCTTTCATGAAAACTATGCTTCCTCAAAGTGGTGCTTGGGTGAACTCAGCAAGATTATGGAATGCAAGAAAGATAAAGGACAGATTGTGATACCAGTATTTTACAACATAGATCCATCACATGTGAGAAAGCAGACTGGGAGTTACGAACAAGCCTTTGCAAAACATGAGGGAGAACCCAGGTGCAACAAATGGAAAGCAATTCTAACTGAAGTAGCCAATTTAGCTGGGTGGGACTTTCAAACTTATAGGACTGAGCCTGAATTCCTTAAAGACATTGTTGAAGATATTTTGCAAAAATTGGCTCCTAGATACCCAAACCAGCGTAAAGGACTGGTTGGAATTGAGGAAAGTTACAAACAGATTGAATCAATACTAAAAATTGGGTCAAGTGAAGTCAAAACCCTTGGAATATGGGGCATGGGTGGCTTAGGTAAGACCACCCTTACTACTGCTTTATATGACAAACTGTCTTGTGAGTTTGAAGGTCATTGCTTCCTTGCAAATGTAAGGGAAAAATCAGACAAACTTGAAGCTTTACGCGATGAACTCTTTTCTAAGTTGTTAAAGAATAAAAATCATGGTTTTGATAATTTTGACATGCATAGGCTTCAACGTAAAAAAGTTTTCATTGTGTTGGATGATGTTGATACCTCAGAGCAATTAGAAAAACTAATTGTAGAATATGATTTCTTGGGACCAGGAAGTAGAGTCATTGTTACAACTAGAAATAAGCAAATACTTAGTCTAGTTGATGAAATATATCCTGTCAAGGATTTGAGCTCTCATTACTCTCTTCAGCTTTTCTGTTTGACTGCTTTTGGGAAAAAAACAACCTAA 954 0.3721 MDVYAGVKVQHLEFIMAEQMISAVASSSNYSKKYDVFLSFHENYASSKWCLGELSKIMECKKDKGQIVIPVFYNIDPSHVRKQTGSYEQAFAKHEGEPRCNKWKAILTEVANLAGWDFQTYRTEPEFLKDIVEDILQKLAPRYPNQRKGLVGIEESYKQIESILKIGSSEVKTLGIWGMGGLGKTTLTTALYDKLSCEFEGHCFLANVREKSDKLEALRDELFSKLLKNKNHGFDNFDMHRLQRKKVFIVLDDVDTSEQLEKLIVEYDFLGPGSRVIVTTRNKQILSLVDEIYPVKDLSSHYSLQLFCLTAFGKKTT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03415 317 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 314 IPR044974 GO:0006952
Pumo3g03415 317 Pfam TIR domain 39 151 IPR000157 GO:0007165
Pumo3g03415 317 PRINTS Disease resistance protein signature 173 188 - -
Pumo3g03415 317 PRINTS Disease resistance protein signature 241 255 - -
Pumo3g03415 317 Gene3D - 40 136 IPR035897 -
Pumo3g03415 317 Gene3D - 137 292 IPR027417 -
Pumo3g03415 317 SUPERFAMILY Toll/Interleukin receptor TIR domain 26 116 IPR035897 -
Pumo3g03415 317 SMART till_3 4 113 IPR000157 GO:0007165
Pumo3g03415 317 Pfam NB-ARC domain 160 315 IPR002182 GO:0043531
Pumo3g03415 317 Coils Coil 205 225 - -
Pumo3g03415 317 ProSiteProfiles TIR domain profile. 1 139 IPR000157 GO:0007165
Pumo3g03415 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03415 Pumo-Chr3 66641731 66644113 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03415 46 307 WRKY Transcription Factor Family AT4G12020 29.412 1.47e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03415 - - vun:114169696 418.698