Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03407 ATGCCAGGCATTCCTGTTGCGGCTCGTGCTACCTCAAGCCATCCAGATGCTTGCGAACATTTATCTGCGGAAGAGGAGCTTGCAGCTGAAGAGAGTCTTTCAATTTATTGCAAGCCCGTAGAACTTTACAACATTCTCCAGCGACGTGCCATGAGAAATCCATCATTCCTTCAGAGATGTTTACACTACCGGATAAAGGCAAAGCACAAGAAGAGAATACAAATGACAGTTTCCTTGACGCGGACTATAACTGAAAGTCAAAATGTGTTTCCCATGTCTATCTGTCTTGCAAGGCGGGTTTCTGATCATGGAGCTTCAAGGCAATCGGCTGTGTATCGAATCGGTCGGATTTTCATCTTTCGAAACTCCCCTGGAATTGATTTGAATACTCAAGTCCAAGCAAATTTTACACTCCCTGAAGTCAACAAGTTAGCTGAGGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGTGGAAAACTCAAATTTATCATCTGGAGTCAATTCAAACTCTACGCCTTCGGATCTGAGTCATCTAGCTTTTTTTGAATCTGGAGAATACTGCCTTTGCGGAAAAGTGTCTTTAGAATCACTTTATATGGCTTGGGATTGTTTTCCGAATTTTCGTTTGGGACAGCGTGCAGAGATTATGTCAACTGTGGATTTGCTTCCATGTATTCTGAAGTCAGATTTTCAAAATGAGGATACAAGAGTCTCCATTCAAGTTCCCTCTAATTTTGAGAATATGAGTACATCAAAGCAAGTACAAATCACAATTTCTGCTGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTATCTTTCATATGCAGGCAGTGAAGTACCGTCCCCATCATTATCTCACATGATCGGGTTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTGCAGAGGACCGAAGTCACCGAAGATTTCACTTGTCCATTCTGTTTGGTTAAATGCGCTTGTTTTAAGGGTCTAAGATGTCATTTGTCATCGTCACATGATCTCTTCAACTTTGAATTTTGGGTATCAGATGAATGTCACGCTGTAAATGTGTCTGTGAAAAATGATATCTCAAGATCGGAGATTGTTTCTGATGATGTTGATCCAAGAGTGCAAACATTTTTCTTTTGTGGAAAGCCTCTTAAGCGTAGGACACCAAAGGACCAATCTTCGAAAAATGCAATGGGCTTAGAGTCTTCCTTTCCTGCAGGAGAGACTGATATTTTGGAGAAGGATGATGGGATTTCTGCCACAATTATTCGATCACACCCTGACCGAGACTCTGTCCAGTCAATGTCTGACTGTGAAGCAGTGCTTCAGTTTGCCAAGACAAGGAAGTTGTCAATTGAGCGTCCTGACTCACGAAACAGTACCCTCTTGAGGAAGCGTCAATTTTTTCATTCTCACAAAGCTCAGCCAATGGCAATTGAACAAGTTCTATCAGATAAAGATAGCGAAGATGAAGTTGATGATGATGTTGCCGATTTTGAAGATCGAAGGATGCTTGAAAATTTTGTTGATGTGAGCAAGGATGAGAAGAATTTCATGCATATGTGGAACTCATTTGTTCGGAAGCATCGTGTGATTGCGGATGGTCACATTTCATGGGCATGTGAGGCTTTCTCAAAATTGCATGCACCCGAGTTTGATCAATCCCGCTCGCTGGCTGGGTGTTGGAGAATATTTATGGTCAAATTGTACAATCATGGTCTTCTAGATGCTCGGACCATGAATGACTGTAATATTATTCTTGACCAATACCATAAGCAGAATTCAGATCCCAAAAGCTAA 1824 0.4139 MPGIPVAARATSSHPDACEHLSAEEELAAEESLSIYCKPVELYNILQRRAMRNPSFLQRCLHYRIKAKHKKRIQMTVSLTRTITESQNVFPMSICLARRVSDHGASRQSAVYRIGRIFIFRNSPGIDLNTQVQANFTLPEVNKLAEEARSCSLDILFVSTATVENSNLSSGVNSNSTPSDLSHLAFFESGEYCLCGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFQNEDTRVSIQVPSNFENMSTSKQVQITISAEEFGAKEKSPYLSYAGSEVPSPSLSHMIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCACFKGLRCHLSSSHDLFNFEFWVSDECHAVNVSVKNDISRSEIVSDDVDPRVQTFFFCGKPLKRRTPKDQSSKNAMGLESSFPAGETDILEKDDGISATIIRSHPDRDSVQSMSDCEAVLQFAKTRKLSIERPDSRNSTLLRKRQFFHSHKAQPMAIEQVLSDKDSEDEVDDDVADFEDRRMLENFVDVSKDEKNFMHMWNSFVRKHRVIADGHISWACEAFSKLHAPEFDQSRSLAGCWRIFMVKLYNHGLLDARTMNDCNIILDQYHKQNSDPKS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03407 607 CDD VEFS-box_EMF2-like 471 598 - -
Pumo3g03407 607 Pfam VEFS-Box of polycomb protein 458 593 IPR019135 -
Pumo3g03407 607 PANTHER POLYCOMB GROUP PROTEIN 20 606 - -
Pumo3g03407 607 CDD ZnB-Zn_EMF2-like 297 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03407 Pumo-Chr3 66477637 66498472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03407 1 597 C2H2 Transcription Factor Family AT5G51230 53.822 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03407 - - gmx:100798991 1136.71