Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03376 ATGCTCGTGACCAATGAGTTCATACTAGGACGGCGTATGAACTCATTGGCCACGAGCATTGTTGTAACCAATCGCTATGATAATGCTAGGAAATCTAGTGGTACCTTGGTTTACAGAGGTCATGGAGGAAATCCCAATGTAAAGAGTAATGTTTCACTTCACGATCAAAAGTTGGAAGGAGGAAATTTGGTTTTGAAGAATAGCATGGATGCTAAAAGCCCTGTGAGGGTTATAATGAAGGTTTATGAACATTCTGGTAGAATGAATAGTTGCACTACCAACATCTCATTTGTTTATGATGGCTTGTATTTAGTGAATAAGATGATGGAACGTACTAAGAGGGCAATTTGGAAAGTTTGTCTTCAAGTTTACATTGAATAG 381 0.3832 MLVTNEFILGRRMNSLATSIVVTNRYDNARKSSGTLVYRGHGGNPNVKSNVSLHDQKLEGGNLVLKNSMDAKSPVRVIMKVYEHSGRMNSCTTNISFVYDGLYLVNKMMERTKRAIWKVCLQVYIE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03376 126 Pfam SAD/SRA domain 10 120 IPR003105 -
Pumo3g03376 126 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 15 111 - -
Pumo3g03376 126 SMART G9a_1 5 122 IPR003105 -
Pumo3g03376 126 Gene3D - 4 123 IPR036987 -
Pumo3g03376 126 ProSiteProfiles YDG domain profile. 1 126 IPR003105 -
Pumo3g03376 126 SUPERFAMILY PUA domain-like 13 112 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03376 Pumo-Chr3 64102640 64103020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03376 10 107 Su(var)3-9 homologs AT1G73100 37.755 2.21e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03376 - - gmx:100807574 136.346