Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03348 ATGAAGAACTCTGCTTCGGAAAGTGGTATGTACATCATTGAGAGTGATGAAGATGTGGAGAAGGATCTGCAGAAAGACGAAAATGATGGAAACGATTCGGATTATTCGAATGATTCCAATGAAAACATGAGGAAACCCAGCAGTTACAGCATCGCGTGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTACCATCACCAAACATTGGGTTTCTTGGCACCACATCACTGTCAAGATTAGGCAGTTCTTTTATTTCTTCATCTTTGACAAGGAGGCACACTCAGGAAATACTACCACCAGAGAAAAAATCACTCTTGCAACCCACAGAAGAGGAGAAACCGCGACATACATTGCTTCCTCCCCAACTATCTAGGAAGTCTTCCATTAAGATTCCCAAGGTTTCTCATGAAGCTCACATTCCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGTATAGGAATCCTTTCAACCCCTTATGCTGCTAAAGAAGGTGGATGGGTTGGTCTTTCTGTATTGTTAGTGTTTGCACTTTTCTCCTTTTATACCGGGTTGCTCTTGCGTTACTGCTTGGATAGTGCACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACTACTGGACGTGTCATCATTTCTGTAAAGTATATTACTAATCATGTCATGTGGCAATCACTTCACCTACTAAATATTTTTATGCAGGCTTGTTGCATTGAGTACATAATTGTGGAGAGTGACAACTTGTCTACATTATTTCCAAATGCACACATTAGTTTGGGTGGAATTGAACTCAATGCACACATTTTGTTTGCAATAATAACTGCCGTGGCTCTTCTTCCTACTGTTTGGCTACGTGACCTACGCATTCTCAGTTACATCTCAGCTTGTGGAGTTATTGCAACGATTCTAGTGGTTCTATGCTTGTTCTGGGTTTGCTTCATAGACAATGCTGACATTCATACCCAAGGAACAACGACAACATTCAATTTAGCAACTTTTCCTGTTGCAATAGGTCTCTATGGTTACTGCTATGCAGGGCATGCTGTGTTCCCAAACCTCTATACGGCCATGGCAAATAGGAATCAATTCCCTGGAGTGCTCTTAGTATGTTTTGCTATTTGTACAACTTTGTATTGTGCAGTAGCTATTATGGGTTACTCAGCGTTTGGAGAAGCAACACTCTCTCAGTATACTCTTAACATGCCCCAACACTTGGTGGCTGCCAAGATAGCTGTGTGGACTACGTGCCTCACCAAATTTCTGCTATTAATTTTCATATGCTTGGTCAAAACAATCCCCATCTTAGCACCCACATATGCATTGAGTCTATCTCCAGTAGCAATGTGTCTAGAGGAGTTGATACCAGCAAGCAATCCCAACTTTTTCATATATTCCAAGCTCATCAGAACAGCTCTAGTAGTTTCTACACTACTTGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTGATGTCATTGACAGGATCTTTGCTCACAATGTTTGTTTCCTTGATTCTTCCTGCTGCTTGTTTCCTAAGCATAAGGGGTGGCAGAATCACGCGCTTTCAGGGAGCTCTTTGTGTCACAATTATTATAGTAGGTGTTGTATCAAGTTGTTTCGGATCATACTCAGCCCTCACCGAGATCATTGAGGAGTTGTTTGGATGA 1707 0.4206 MKNSASESGMYIIESDEDVEKDLQKDENDGNDSDYSNDSNENMRKPSSYSIAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFISSSLTRRHTQEILPPEKKSLLQPTEEEKPRHTLLPPQLSRKSSIKIPKVSHEAHIPGQCTFGQAVLNGINALCGIGILSTPYAAKEGGWVGLSVLLVFALFSFYTGLLLRYCLDSAPGLETYPDIGQAAFGTTGRVIISVKYITNHVMWQSLHLLNIFMQACCIEYIIVESDNLSTLFPNAHISLGGIELNAHILFAIITAVALLPTVWLRDLRILSYISACGVIATILVVLCLFWVCFIDNADIHTQGTTTTFNLATFPVAIGLYGYCYAGHAVFPNLYTAMANRNQFPGVLLVCFAICTTLYCAVAIMGYSAFGEATLSQYTLNMPQHLVAAKIAVWTTCLTKFLLLIFICLVKTIPILAPTYALSLSPVAMCLEELIPASNPNFFIYSKLIRTALVVSTLLVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRGGRITRFQGALCVTIIIVGVVSSCFGSYSALTEIIEELFG 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03348 568 MobiDBLite consensus disorder prediction 1 47 - -
Pumo3g03348 568 Pfam Transmembrane amino acid transporter protein 147 557 IPR013057 -
Pumo3g03348 568 PANTHER OS05G0424000 PROTEIN-RELATED 155 548 - -
Pumo3g03348 568 MobiDBLite consensus disorder prediction 14 32 - -
Pumo3g03348 568 FunFam Amino acid transporter AVT1A 145 565 - -
Pumo3g03348 568 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03348 Pumo-Chr3 61834954 61848799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03348 1 501 Amino Acid or Auxin Permease AAAP Family AT2G39130 56.505 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03348 K15015 - gmx:100798108 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03348 3 61834954 61848799 Pumo3g03348 3 61834954 61848799 ECH