Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03301 ATGGCCGACGACTTCGAATTCGCCGACAAAGTCCCTCCTTCCTTCGATCGCGCGGGAAATGCAAAAGGGTTCAACCCAGGATTAATTGTTCTCCTGCTTGTTGGTGGGTTGCTGTTGATATTCCTCGTTGGAAATTATGTACTGTACACATATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAATCTCAAAGAAGAAGATGAAAAAGGAGAGAATGAAGCAGGGCGTCTCTGCACCTGGAGAGTAG 252 0.4722 MADDFEFADKVPPSFDRAGNAKGFNPGLIVLLLVGGLLLIFLVGNYVLYTYAQKTLPPRKKKPISKKKMKKERMKQGVSAPGE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03301 83 MobiDBLite consensus disorder prediction 57 83 - -
Pumo3g03301 83 MobiDBLite consensus disorder prediction 59 73 - -
Pumo3g03301 83 PANTHER DNA-BINDING PROTEIN S1FA2 1 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pumo3g03301 83 Pfam DNA binding protein S1FA 20 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03301 Pumo-Chr3 60702964 60705193 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pumo3g03301 S1FA 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03301 - - gmx:100500059 114.005